Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4882g00045 ATGTCTTGCTCGCCGGCCGCCGGTGACTTGCTGTGCGGTGAGGTTGCCGATGAAGTTGTCTACGGTGAAAACCAAAGGACGTCGCCGCCGTACTTGCAGCCGTATTCACCTCCTTCAGACGACGCAACCATCGGCGGACTCATCGACGTCGAGGCACAGCACATGCCCGACCCAGATTACCTGCGGCGGTGCCGTTTTCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCGCGCACACTACGAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTGTCTTGCTCTCCACTTCCGCGACAAAGTCAGTGGGAGTATCATCTGCTATCAGTGGCATGCTTGTCTTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAAACGATTCAAAGAATGGAGCTGTGTGTCATGACCAAGCTAAGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATTACTTCATCTCTAAGCTCTCTTGCGACCCGCAACCCGATTCCATAGCCCGGCTCTTCTCCGCTGCTTCCAATCTCATCCTCAGCACCGCCCTCGTTATTGATTTCTTGGGTTTTGCGCCGTCGGCCATAGCGGCCGCTGCGGTTCTCTGTTCAGCTGGCCAGGGCCAATCGCCGCCGTTCTTCCATGATGGAGTAAACAAAGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTATGCTGGCTATAAATGCCCCGGAGCCGAGCCGGAGCGGCCTTCGAGTCCAGTAGGAGTGCTCGACGCTGTTAGTTCATGCGGCAGCTGCGAAACTCGCTCGGAGAACCCAGCGTCAACCAGCGAAGCCGAGCCGCTCAACAGGCGGGCGCGATCCCCTGATCCTGCCGGGGAATAG 984 0.5508 MSCSPAAGDLLCGEVADEVVYGENQRTSPPYLQPYSPPSDDATIGGLIDVEAQHMPDPDYLRRCRFRLIDVTARQDSINWILKVRAHYEFRPVTAFLSVNYLDRFLSCSPLPRQSQWEYHLLSVACLSLAAKMEEPEVPLLLDLQLVDPRFVFEPKTIQRMELCVMTKLSWRLRSITPFDYLHYFISKLSCDPQPDSIARLFSAASNLILSTALVIDFLGFAPSAIAAAAVLCSAGQGQSPPFFHDGVNKEMVRSCHQLMEDYVVDTCPYAGYKCPGAEPERPSSPVGVLDAVSSCGSCETRSENPASTSEAEPLNRRARSPDPAGE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4882g00045 327 Gene3D - 47 236 - -
Pral4882g00045 327 MobiDBLite consensus disorder prediction 297 327 - -
Pral4882g00045 327 CDD CYCLIN_AtCycD-like_rpt1 73 171 - -
Pral4882g00045 327 SMART cyclin_7 79 167 IPR013763 -
Pral4882g00045 327 SUPERFAMILY Cyclin-like 45 173 IPR036915 -
Pral4882g00045 327 FunFam D6-type cyclin 171 258 - -
Pral4882g00045 327 SMART Cyclin_C_2 176 299 IPR004367 -
Pral4882g00045 327 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Pral4882g00045 327 Pfam Cyclin, C-terminal domain 176 264 IPR004367 -
Pral4882g00045 327 FunFam D2/4-type cyclin 57 170 - -
Pral4882g00045 327 Gene3D - 57 174 - -
Pral4882g00045 327 PANTHER CYCLINS 49 265 IPR039361 -
Pral4882g00045 327 Pfam Cyclin, N-terminal domain 47 173 IPR006671 -
Pral4882g00045 327 MobiDBLite consensus disorder prediction 297 315 - -
Pral4882g00045 327 CDD CYCLIN_AtCycD-like_rpt2 176 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4882g00045 Pral-Chr4882 189943 192130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4882g00045 9 267 Core Cell Cycle Gene Families AT1G70210 43.123 5.08e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4882g00045 K18810 - tcc:18608104 359.377