Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4882g00014 ATGAGCTGCAACGGTTGTCGTGTGCTTAGGAAAGGTTGCAGCGACGACTGCATGCTCCGAGATTGCCTTCTGGGCATAGAGAGCCCACAAGCCCAAGCCCATGCCACCGTCTTCGTCGCTAAATTCTTCGGCCGCGCCGCCCTCATGTCCTTCGTCTCCGCCGTACCCTCCCCGCAGAGATCCGCTTTGTTTCGATCGCTTTTGTACGAAGCAGTGGGACGAACCATAAATCCGGTGAACGGTGCAGTGGGCCTGCTCTGGACCGGGAATTGGCATCTTTGCCAATCAGGAGTTCAGAGAGTTCTCTACGGCGGCGCCTTGACTCCACTCCCTGACGTCTCCGGAGGAAATTCGGCACCGACTGCGGCGGAGGACGATTGCTTCGGACCCGTTCTAGATCTTTCTAGGCAGCGAGACTATATGGCGGGATTGGGATCAAGTAACCTAAAGAGAAAAGTTCGTTGTTACGACTTCGTGTTGGAGAATAATATCCAAGCACGCGATCATCTTGTTGATCATCAGTACTGCTTGGGGAGATCAGGTTCGCCGGAGAGAGTGGTAGTGGTTGGCACCGGCCGAAAGGATGATGGGAGCGCAGCGACGCCATCGGAGGGATCTGAAACGTCAACGTTAGGGAGTAGCGCTGCGCAGTGTGGCACTGCTGAAAGGAAGCTCCTCAGGCTTTTCTTCTAG 693 0.5541 MSCNGCRVLRKGCSDDCMLRDCLLGIESPQAQAHATVFVAKFFGRAALMSFVSAVPSPQRSALFRSLLYEAVGRTINPVNGAVGLLWTGNWHLCQSGVQRVLYGGALTPLPDVSGGNSAPTAAEDDCFGPVLDLSRQRDYMAGLGSSNLKRKVRCYDFVLENNIQARDHLVDHQYCLGRSGSPERVVVVGTGRKDDGSAATPSEGSETSTLGSSAAQCGTAERKLLRLFF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4882g00014 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 123 - -
Pral4882g00014 230 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Pral4882g00014 230 MobiDBLite consensus disorder prediction 201 215 - -
Pral4882g00014 230 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pral4882g00014 230 MobiDBLite consensus disorder prediction 192 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4882g00014 Pral-Chr4882 66349 67636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4882g00014 1 116 AS2 family AT3G49940 72.414 3.05e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4882g00014 LOB 2.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4882g00014 - - pcin:129284755 336.265