Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4882g00003 ATGCTTCGTTTGTGCTACAGGCCGCTGGAGCGTTGTTTTGGATGGCGAGGATGCGGTGGCGGCGGCACCGGTGGCGATGGCCTGTTGTGGCACTCTGACTTGAAGCCTCATGCCTCTGGCCACTACTCCATCGCCGTCGCTCAGGCCAATTACAGTCTCGAAGATCAGAGCCAAGTCTTCACGTCTCCCTCCGCCACCTACATCGGCGTCTATGATGGTCACGGTGGACCCGAAGCTTCCAGATTCGTCAACAAACGCCTCTTCCCTCATCTACAGAAGTTTGCTTCTGAACAAGGTGGATTGTCCGTGGATGTGATAAAAAAGGCGTTTAAGGCCACTGAGGACGAATTTTTGCATTTGGTGAAGCGAACATTGCCTATGAGTCCCCAAATTGCTTCAGTAGGATCATGCTGTCTTCTTGGTGCAATTTCTGATAATATGCTGTATGTTGCAAACCTTGGAGACTCTAGAGCTGTTCTTGGCCGGCGAGATTCAGAGAGCAAAAAATGCTCAGTGGTGGCAGAGCGGTTATCAACAGACCATAATGTGGCCTTCGAGGAGGTGAGGAGGGAGGTGGAGGCCCTCCATCCTGACGATTCACACGTTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAAGGCATTATCCAGGTGTCAAGATCCATTGGTGATGTGTATCTCAAGAGACCTGACTTTTACAGAGACCCGGTTTTTCAGCAGTTTGGAAACCCAGTTCCTTTGAAGCGTCCAGTAATGACAGCTGAACCATCAATCCTTATTAGGGAGCTTGAGTCGGAAGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATCAAGCAGCAGTTGAGATTGTTTTTAAGCATCCAAGAGCCGGAATCGCCAAGAGATTGGTAAGAGCTGCTCTGCAAGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGATATAAAGAAAATTGACAAGGGAATAAGAAGACATTTCCATGACGATATCACTGTTATCGTTATATATCTTGATCACCACAATGGTTCCCCTTATGATAGATCTAAACCAAATACTGTTGGCTGCACTAGTGCCCCTGTGGATATTTTCTCCCTCAATGCAGATGAGTCAGAACAGAGCATGCTCCGTTCGGTTGCTTAA 1158 0.4724 MLRLCYRPLERCFGWRGCGGGGTGGDGLLWHSDLKPHASGHYSIAVAQANYSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLFPHLQKFASEQGGLSVDVIKKAFKATEDEFLHLVKRTLPMSPQIASVGSCCLLGAISDNMLYVANLGDSRAVLGRRDSESKKCSVVAERLSTDHNVAFEEVRREVEALHPDDSHVVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPVPLKRPVMTAEPSILIRELESEDLFLIFASDGLWEQLSDQAAVEIVFKHPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHNGSPYDRSKPNTVGCTSAPVDIFSLNADESEQSMLRSVA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4882g00003 385 PANTHER PROTEIN PHOSPHATASE 41 342 IPR015655 GO:0004722|GO:0006470
Pral4882g00003 385 Gene3D - 32 350 IPR036457 -
Pral4882g00003 385 FunFam Probable protein phosphatase 2C 42 32 350 - -
Pral4882g00003 385 SUPERFAMILY PP2C-like 46 345 IPR036457 -
Pral4882g00003 385 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Pral4882g00003 385 SMART PP2C_SIG_2 41 343 IPR001932 -
Pral4882g00003 385 CDD PP2Cc 54 343 IPR001932 -
Pral4882g00003 385 Pfam Protein phosphatase 2C 63 312 IPR001932 -
Pral4882g00003 385 ProSiteProfiles PPM-type phosphatase domain profile. 41 343 IPR001932 -
Pral4882g00003 385 SMART PP2C_4 31 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4882g00003 Pral-Chr4882 22915 25749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4882g00003 26 344 PP2C-type Phosphatase Gene Family AT3G51370 58.716 2.05e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4882g00003 - K01102 gmx:100812137 622.468