Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4880g00004 ATGTTATTTAAGAAAAAACGTGGTGGGTCGGCACAGGAAATGGGGTGCTGCACTGATTCCGGCGCCACGGCGGCTGGTGGCGGTGGCCGGAGACATTCGAAGAAAGCCAGAGCGGAGAACCCCACTTCAACAGGACATGCAAAGAGGAAGGAGAAACTTGGGGAGCGAATCGCAGCGTTACAACAGCTCGTTTCTCCATTTGGGAAGACAGATACAGCTTCGGTGCTTCACGAGGCAATGGGATACATAAGGTTTCTCCACGACCAAGTTCAGGTCCTCTGCTCGCCTTACTTGCAGGCACCTCCTCCTTCGCCTCATCCCCGCCACCACCGTACGGGAGATGGGGTTAACATGAACAAGAGACAGGAAGGCAAAGGAGAGTTGAGTAGCAGAGGACTATGTCTGATCCCAGTGGAATCCACCGTACACGTGGCCAGCAGTAATGGTGCTGATTTCTGGTCACCTGCGATGGGGATTAACGTTTCCTCATCAACAAGATCCTGA 504 0.5337 MLFKKKRGGSAQEMGCCTDSGATAAGGGGRRHSKKARAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQAPPPSPHPRHHRTGDGVNMNKRQEGKGELSSRGLCLIPVESTVHVASSNGADFWSPAMGINVSSSTRS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4880g00004 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 103 IPR036638 GO:0046983
Pral4880g00004 167 MobiDBLite consensus disorder prediction 107 127 - -
Pral4880g00004 167 Gene3D - 32 99 IPR036638 GO:0046983
Pral4880g00004 167 FunFam Transcription factor bHLH113 30 100 - -
Pral4880g00004 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 143 - -
Pral4880g00004 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 37 86 IPR011598 GO:0046983
Pral4880g00004 167 CDD bHLH_AtbHLH_like 48 93 IPR045239 -
Pral4880g00004 167 MobiDBLite consensus disorder prediction 32 51 - -
Pral4880g00004 167 MobiDBLite consensus disorder prediction 101 129 - -
Pral4880g00004 167 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4880g00004 Pral-Chr4880 46986 50973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4880g00004 48 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 51.220 8.60e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4880g00004 - - pcin:129287021 237.269