Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4879g00005 ATGAACTCCAACTCCAGGAACCCTCATTTTGGGTGTAAAGTTTTATTCTTTCATTTTCTTCTTCTTCTTCTTCGATCATTTGCTCTGAACCCTGATGGGGTTCTCTTGCTATCCTTCAAGTATTCGATCCTCAGCGACCCACTTTCAGTCCTAGAAAATTGGAGCTACAGCGATGAGTCATCATGCTCGTGGAATGGAGTCAAGTGTACAAAAATTGGAGGGAAGTTTAGAGTGACCAGTTTGGCTCTTCCCAGTAGCAAGCTTCTGGGTTCGATTTCTGAAGACCTTGGGATGATCGAACACCTCCGGGAGCTTGATCTTTCCAACAATTTCCTTAATGGGTCTGTACCCAATTCCATATTCAACGCTTCTGAGCTTCGAGTTCTTTCTCTCGCCAGCAATGTCATCGCCGGTGAGCTATCAGAGTCGATTGGTCAGTTGAAAACTCTTCAACTTTTAAACCTATCTGACAATGCCTTTGCTGGGTCAGTCCCAGCAAGTCTCATTACTTTGAAAAATCTTACCTTTGTTTCTTTGAGGAGTAATTACTTTTCTGGTAAAGTTCCAAGTGGGCTTCACTCTGTTCAGAATTTAGATCTGTCTTCGAATTTGCTTAATGGGTCTTTACCAGATGACTTTGGCGGGGATAGCTTGAAATACTTGAACCTCTCCTACAACAAAATTTCAGGAACAATCCCACCACAATTTGCCAAAAAGATACCTGGAAACTCCACAGTAGATCTCTCCTTCAACAATCTAACGGGTCCAATACCCCAGTCTCTGGCTTTGCTTAACCAGAAACCTGAGTCACTTTCTGGGAATTCTGATCTTTGTGGAAAGCCCCTGAAAGTCATTTGTTCTATTACTTCGACTGGTTCAAACCCACCCAACTCCACCACCTCATCAACACCAGCAATTGCAGTCATGCCCAAAGCAATTGACGCCAACCCCAAAACAAACAGTTCAGGAACCCCCAATGGGTCTCAGAATAGGCCAACAAATAGCCTCAAACCATCCAGCATAGCCGGAATCGTCGTGGGCGACATTGCCGGAATAGGTCTTTTAGTCGCAATTGTTCTCTTGGTCTACCAACAACGGAAGAAAAAAGATGCTAAATCCACCGAAAATGTTATCGAGACTGCATCGAAACAAGACCCGGAAGTCAAAAAATCCACAATCCCCTGCTTCTGGTTAGCTGTTGACGACAAGGAGACGTCCGAAGCAACGAGCTCCGACAGCGACCTAGAGAATAATAATAAGAAGACTGAAATGACGACCCAAAACGAGAATCTCCGGAAAGAAGGGAGGTTTGTGACAGTGGATGGAGAGACGAGGCTGGAGCTAGAGACATTACTGACGTCGTCGGCGTATATTCTGGGAACAAGCCGAGGGAGCATAGTGTACAGAGCAGTGCTGGAGGATGGAAGAGCGTATGCTGTGAGGAGGATAGGGATTGGAGAATGTGCAGTAGAGGGGATGAAGGATTTCGAGAATCATGTAAAAACAATCGCCAAGATTCGTCATCCCAATTTGGTCAGAGTTCGTGGATTCTGCTGGGGAATGGATGAGAAGCTCCTTATCTGTGATTACGTCCCCAATGGAAGCCTCGCCAACCTTTGTCACAGAAGAACAGGGTCATCGGCATCGAGCTTGGCGTTGGAGGCTCGGCTGAAGATAGCAAGAGGAATAGCACGAGGCATAGCTTTCGTCCACGACAAGAAACATGTGCACGGCAACATCAAACCCTCCAACATACTCTTCAATTCCGACATGGAACCCGTCATCACCGACCTCGGCCTCGACCGCATCCTCTGCAACCCCAACAACTTCAACCTCAGAGCCAACGGTTCATCTCGCCAAATAGCATACCAGACACCGGAGTGGTTCCAAAGCTTCAAACCCAACCCAAAGTGCGATGTGTATTCCTTTGGCATTGTCTTGCTCGAGCTTCTCAGTGGGAGATCTGTCTCAGACTTGGACATAGGGCAGTGGCCGCAGTGTGATGACGTGGAGGAGGAGAGGATTAGGGTGTTGAGGGTGGCTGATGTGGCCATAAGGTCTGAGATCGAAAATAAGGAACATGTTATATTAGGGTGCTTCAAGCTGGGGCTTACTTGTGCTTCTTCTCTCCCACAGAAGAGACCCTCCATGAAAGAAGCTCTACACATGTTAGAAAAGATGATTCGCAGCTAA 2193 0.4674 MNSNSRNPHFGCKVLFFHFLLLLLRSFALNPDGVLLLSFKYSILSDPLSVLENWSYSDESSCSWNGVKCTKIGGKFRVTSLALPSSKLLGSISEDLGMIEHLRELDLSNNFLNGSVPNSIFNASELRVLSLASNVIAGELSESIGQLKTLQLLNLSDNAFAGSVPASLITLKNLTFVSLRSNYFSGKVPSGLHSVQNLDLSSNLLNGSLPDDFGGDSLKYLNLSYNKISGTIPPQFAKKIPGNSTVDLSFNNLTGPIPQSLALLNQKPESLSGNSDLCGKPLKVICSITSTGSNPPNSTTSSTPAIAVMPKAIDANPKTNSSGTPNGSQNRPTNSLKPSSIAGIVVGDIAGIGLLVAIVLLVYQQRKKKDAKSTENVIETASKQDPEVKKSTIPCFWLAVDDKETSEATSSDSDLENNNKKTEMTTQNENLRKEGRFVTVDGETRLELETLLTSSAYILGTSRGSIVYRAVLEDGRAYAVRRIGIGECAVEGMKDFENHVKTIAKIRHPNLVRVRGFCWGMDEKLLICDYVPNGSLANLCHRRTGSSASSLALEARLKIARGIARGIAFVHDKKHVHGNIKPSNILFNSDMEPVITDLGLDRILCNPNNFNLRANGSSRQIAYQTPEWFQSFKPNPKCDVYSFGIVLLELLSGRSVSDLDIGQWPQCDDVEEERIRVLRVADVAIRSEIENKEHVILGCFKLGLTCASSLPQKRPSMKEALHMLEKMIRS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4879g00005 730 MobiDBLite consensus disorder prediction 314 337 - -
Pral4879g00005 730 SUPERFAMILY Protein kinase-like (PK-like) 458 725 IPR011009 -
Pral4879g00005 730 Gene3D Transferase(Phosphotransferase) domain 1 531 730 - -
Pral4879g00005 730 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Pral4879g00005 730 ProSiteProfiles Protein kinase domain profile. 453 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4879g00005 730 CDD STKc_IRAK 459 727 - -
Pral4879g00005 730 Gene3D Phosphorylase Kinase; domain 1 411 530 - -
Pral4879g00005 730 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Pral4879g00005 730 MobiDBLite consensus disorder prediction 407 432 - -
Pral4879g00005 730 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515
Pral4879g00005 730 Pfam Leucine Rich Repeat 217 236 IPR001611 GO:0005515
Pral4879g00005 730 FunFam Leucine-rich repeat receptor-like protein kinase 194 288 - -
Pral4879g00005 730 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Pral4879g00005 730 MobiDBLite consensus disorder prediction 315 337 - -
Pral4879g00005 730 FunFam Leucine-rich repeat receptor-like protein kinase 29 190 - -
Pral4879g00005 730 SUPERFAMILY L domain-like 32 283 - -
Pral4879g00005 730 PANTHER OS05G0588300 PROTEIN 171 727 - -
Pral4879g00005 730 Pfam Protein kinase domain 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4879g00005 Pral-Chr4879 29357 32377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4879g00005 28 728 Receptor kinase-like Gene Family AT2G15300 52.310 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4879g00005 Pkinase 2.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4879g00005 - - gmx:102667237 854.358