Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4879g00002 ATGGCTACCTTTCCAGTTGGGACTAGTTTGCCTCCTTCACAATCCCAATCCCAGCACTTGCGGAGCCGAGCACTTCACTCTCCATTTCATGGCCTTCGCACCTTCCAATCTCCACTATCATTATCATCTTCTTCCTTCTTTGGTTCTTCTTCTCTTTGTAGAATTACGGGTCTCAGGTTGCCTGGTAATCATGTATTGGCACGCGCTGAAGAGAAGGCTAGAGGTTCTACTTCGTTTCAAGAGCAGCAAGCTGAACAACGTCCCGAGAGACAATTTCAGGACTTGATGTCAGAATCTGGAACATGTGATCCCCTGTGCTCAGTAGATGAAACCAGCTCACTAGATTTTGAAGAAACTTACCAGCCCAAGACTGATTATTTGAAAGCTCTCGCCATATTCGCAGCAGCTGCTGTTGGAGCATTGGCAATTAACCATTCTTGGGTAGCCGCTAATCAGGATCTTGCTATGGCATTGCTATTTGGAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTAGGATTGTTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCTTCAGCTGATGTAGCTGCTTCAGAACTGACACATGCGTCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCGATGACCATTGTTGAGATAGTTGATGCTCATCAAGGGTTTAAGTTGGTTACTGACAATATAACAACTCGAAAGCCACGCACTCTTCTTTGGGTGATTGGGTTTGTCACATTTTTCCTCAGTTCAGTTCTAGACAACCTGACATCTACAATTGTCATGGTTTCTCTGTTGCGGAAACTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGGTGTTGTTGTTATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGCGATGTTACCACTACTATGCTGTGGATACATGGTCAAGTATCCACTTTGCAAATAATGAAGGGATTGTTTGTGCCTTCAGCTATCTCTCTAGCTGTGCCGCTGGCTCTTATGTCACTGACTAGTGAAGTTAATGGGAAGGGACAGGATTCACCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTTGCTGTGGGTCTAGGAGCTTTGATTTTTGTACCAGTGTTCAAAGCCCTCACAGGTTTACCTCCTTACATGGGAATGTTGCTTGGACTTGGTGTGCTTTGGATCCTCACTGATGCTATCCACTATGGTGAATCTGAGAGACAAAAACTAAAAGTACCACAAGCCTTATCAAGAATAGACACTCAAGGAGCACTATTCTTCCTAGGAATTCTATTGTCTGTCAGCAGCCTGGAGGCAGCAGGGATTCTAAGGGAATTAGCAAATTACCTCGATGCTCATATTCCGAATGTTGAATTGATAGCAAGCGCTATTGGAGTCATATCAGCTATAATAGACAATGTTCCATTAGTTGCAGCAACAATGGGAATGTATGATCTATCCACTTTCCCACAGGATTCTGAGTTTTGGCAGTTGGTTGCGTTTTGTGCTGGTACTGGTGGCTCCATGTTAGTCATTGGCTCAGCTGCAGGAGTTGCATTGATGGGGATGGAAAAAGTGGACTTCTTTTGGTACCTACGGAAGGTTAGTGGCTTTGCTTTCGCAGGTTATGCTGCCGGCATTGCTGCGTATCTAGCAGTTAACAGCCTTCACATCTCCTTACCCACAACTCTGGCCGAGATTCCTTTTCTTTCTGGTTCCTAA 1770 0.4475 MATFPVGTSLPPSQSQSQHLRSRALHSPFHGLRTFQSPLSLSSSSFFGSSSLCRITGLRLPGNHVLARAEEKARGSTSFQEQQAEQRPERQFQDLMSESGTCDPLCSVDETSSLDFEETYQPKTDYLKALAIFAAAAVGALAINHSWVAANQDLAMALLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSADVAASELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGQVSTLQIMKGLFVPSAISLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVFAVGLGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNVELIASAIGVISAIIDNVPLVAATMGMYDLSTFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVALMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLAVNSLHISLPTTLAEIPFLSGS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4879g00002 589 MobiDBLite consensus disorder prediction 70 91 - -
Pral4879g00002 589 NCBIfam sodium:proton antiporter NhaD 181 411 - -
Pral4879g00002 589 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 64 589 IPR045016 GO:0006814|GO:0015297
Pral4879g00002 589 MobiDBLite consensus disorder prediction 1 22 - -
Pral4879g00002 589 Pfam Citrate transporter 165 520 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4879g00002 Pral-Chr4879 11134 16744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4879g00002 1 589 Antiporters AT3G19490 77.273 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4879g00002 - - cave:132179303 877.085