Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4878g00001 ATGGCAATCCTCCACCATCACAATGACCAACTAGCTCACCACGAGAACTCTTCCTCTTTCCTTGATGCTCTTTACTGTGATGAAGAAAGATGGGAGGAGGAGGAAGTAGAACAAGTGGAAGGGAATAATGAGACTGGTTTTCTTCTTCCTCGGATCTTGTCGGAGCAAGACTTGTTCTGGGAAGATGAAGAGCTGAACTCTCTCTTCTCCAAAGAAGAAGAAGCTTGCTTTGATCTGGATGTTGATCTTTCTCTGGCTCGTCGTGAGGCAATAGAATGGATGCTTAAAGTTCATGCCCACTATGGCTTCTCTGCTCTAACGGCAACACTGGCCATCAACTATCTGGACAGATTCCTTTCGAGCTTCCATTTTCAAAGGGAGAAGCCGTGGATGATCCAGCTTGTGGCTGTCGCTTGCCTCTCTTTGGCAGCAAAAGTTGAAGAAACTCAAGTTCCCCTTCTTCTAGACCTCCAAGTTGAAGATACTAAATGCATGTTTGAGGCAAAGACTATACAGAGAATGGAGCTGCTTGTTCTATCAGCCCTGAAATGGAAGATGCACCCAGTAACGCCGCTCTCTTTTCTAGATCACATCATAAGGAGGCTTGGATTAAAAACTCATCTTCACTGGGAATTCCTCAGGCGCTGCGAGCATCTCCTGCTCTCTATTCTTCCAGATTCAAGATTTGTGGGTTATCTCCCATCGGTGTTGGCTACAGCGACAATGCTGCGTGTGGTAGACCAGATTGAGCAGAGTGAAGGAATGGAATATAAAAATCAGCTTCTGGGCGTTCTTAAAAGTAACAAGGAGAAAGTAGACGAGTGCTATAATGCGATACAGGAGATGTCAAAGGGCAATAATTATTATAATTATGGGCATAACAAGACTAAGAAACGAAGATATGAGGAAATTAGTCCGGAGAGTCCAAGTGGCGTAATCGACGCAGTTTTTGGGTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATGTTCATCCCCAGAGCCACTGTTCAAGAAGACCAGACCCCAAGAACAGCAACAACAAATGACGTTGTCCCCGTTCAATCGGGTCATTGTCGGAATCGTTGGAGCGTCCCCTTGA 1110 0.4568 MAILHHHNDQLAHHENSSSFLDALYCDEERWEEEEVEQVEGNNETGFLLPRILSEQDLFWEDEELNSLFSKEEEACFDLDVDLSLARREAIEWMLKVHAHYGFSALTATLAINYLDRFLSSFHFQREKPWMIQLVAVACLSLAAKVEETQVPLLLDLQVEDTKCMFEAKTIQRMELLVLSALKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSILPDSRFVGYLPSVLATATMLRVVDQIEQSEGMEYKNQLLGVLKSNKEKVDECYNAIQEMSKGNNYYNYGHNKTKKRRYEEISPESPSGVIDAVFGSDGSNDSWAVGSSLCSSPEPLFKKTRPQEQQQQMTLSPFNRVIVGIVGASP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4878g00001 369 SUPERFAMILY Cyclin-like 59 187 IPR036915 -
Pral4878g00001 369 Gene3D - 86 187 - -
Pral4878g00001 369 SMART cyclin_7 92 180 IPR013763 -
Pral4878g00001 369 PANTHER CYCLINS 63 284 IPR039361 -
Pral4878g00001 369 CDD CYCLIN_AtCycD-like_rpt1 86 184 - -
Pral4878g00001 369 FunFam CYCLIN D32 188 277 - -
Pral4878g00001 369 CDD CYCLIN_AtCycD-like_rpt2 189 279 - -
Pral4878g00001 369 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
Pral4878g00001 369 Pfam Cyclin, N-terminal domain 85 186 IPR006671 -
Pral4878g00001 369 SMART Cyclin_C_2 189 310 IPR004367 -
Pral4878g00001 369 Pfam Cyclin, C-terminal domain 189 305 IPR004367 -
Pral4878g00001 369 Gene3D - 188 279 - -
Pral4878g00001 369 FunFam D3-type cyclin 80 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4878g00001 Pral-Chr4878 3670 5726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4878g00001 12 300 Core Cell Cycle Gene Families AT4G34160 58.020 2.84e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4878g00001 K14505 - gmx:547740 511.531