Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4877g00005 ATGGCCCAACCGCAGCAACCAATGGAACAGGTTCAGTGCTTCGGCCGCAAGAAGACCGCCGTCGCCGTCACTCACTGCAAACGCGGCCGTGGTCTCATCAAGATCAATGGCTGCCCCATCGAACTTGTGCAGCCGGAGATCCTCCGATTCAAGGCTTTCGAACCTATCCTCCTTTTGGGCAAACACCGTTTCGCTGGCGTCGACATGCGGATCCGCGTAAAAGGAGGTGGTCACACCTCTCAGATATATGCTATCCGCCAGAGTATAGCCAAAGCTCTCGTCGCTTTCTACCAGAAATACGTCGATGAACAGAGCAAGAAGGAGATTAAGGACATTCTGGTTAGATATGATCGAACACTCCTTGTCGCCGATCCAAGGCGCTGCGAACCCAAGAAGTTCGGTGGTCGTGGCGCTCGTGCTAGGTTCCAGAAATCATACCGTTGA 444 0.536 MAQPQQPMEQVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4877g00005 147 Gene3D - 2 147 IPR014721 -
Pral4877g00005 147 Pfam Ribosomal protein S9/S16 15 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pral4877g00005 147 PANTHER RIBOSOMAL PROTEIN S9 5 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pral4877g00005 147 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 147 IPR020568 -
Pral4877g00005 147 FunFam 40S ribosomal protein S16 3 147 - -
Pral4877g00005 147 ProSitePatterns Ribosomal protein S9 signature. 75 93 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4877g00005 Pral-Chr4877 35646 36544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4877g00005 5 147 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.210 6.80e-95 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4877g00005 K02960 - cave:132189857 278.485