Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4876g00008 ATGGAGTGTGCCACAACGTTGAAGAGTTTAACGAGGATCTTGGAATGCTTATCACGAGAGAGTGTGAAAAGGATTGGAGTTTATGGGATGGGAGGAGTGGGCAAAACAACTATCATGACAGAAATCAACAATCGTCTTTTAGAAGGGAGAGATTTTGATCTTGTCATGTGGGTTTCTGCACCAAAAGAGCCAAGTCTTGCAAAACTACAGAAGGGTATTGGAGAGAAGCTGGATTTAGATCTTTCGATGATTGATGATGATGTTACTAGAGCAGCCAAGCTATTTGAGGCTTTAAACAGGAGGAGGAAATATGCACTGATTCTGGATGATTTATGGGAGCCTTTCTCTCTTGAAACGGTTGGAATACCGATACCAACAGTCGAAAATGGTTGCAAGTTGGTGATCACAACGCGATTGTTGAGCGTTTGTCGAGGTATGGAAACAGATGAGGACGTGGAAGTGAAGGCCCTTCAAGATGATGAGGCATGGGATCTCTTAAGGTATAAAGTTGGACCAGTAGTGTCAAATTCCGCAGAAGTAGAGGTGATTGCAAAGGAGGTGACAAGAGAGTGCGGAGGTTTGCCTCTTGCTATTGTCACAGTAGGACGAGCCTTAAGAAATGCTGCTGATGTATCAGAGTGGGAGTGTGCATTAGATGAGTTAAGAGCCTCAACAGCGAATATTGAAAGGATGGAAGAAGCAGTCTTTGCACATTTGAGATTTAGCTATGCCAAGCTAAAGGATGACACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTATACCCTGAAAGTCATCAAATTGATACTAATGAGCTGATGGAATATTGGATGTGGGAAGGTTTATTGGGTTATGTTGGAAGAATGGCTGCAATCAAGAGGAGGGGGAAAATGATATTGAATGAATTAAAACATGCGTGCTTGTTAGAAGGTCTAACTCAAAATGCGGTGGAATTCGTTAGAATGCACGATTTGATCAGAGATATGGCTATTACAATCATGAGAACGAGCCCTCACTGCATAAGTAAAGCGGGGACTAGAATGACAAAACATCAATGGATGGAGGAATGGGCAGAAGATGTTCAAAGGGTCTCACTTATGAGAAATGACTTGAAATATATTCCCTTCAATTACAACCTCATGTGCCCTAGACTTACTTCCCTGTTGTTGCAATTCAACTCATTTTCTGAAAATATATCCCATGAATTCTTCGAAAATATGCAGTTTCTGAAAGTTCTGGATCTCTCCTATACTGGGATTGATTTCTTGCCTAACTCAGTCTCTAATTTAGAGAATCTATCTGCTTTGTTATTGAGTAACTGTTGGAATTTATCAACAGTTCCTTCTTTAGCAAAATTGAATAAGTTGATGGTCCTTGACCTCTCCTGCTCTCCAAGGATGAAAGAACTTCCGAATGGGATGCAAAATTTGGGAAACTTGAGACGCTTAAACCTTTCCAAGACTGGAATTGAAATCTTCCCATTTGGATTAATATCCAAATACACCCTTTTGGAAGACTTGCTGATAGGTGGTTGTGGTAGCTTGTGGGGATCAATGACAGTCAAAGCAATTAGCGGTGGAGCTTCCATAGAAGAAGTCATTTCCTCAAATCTGTCTTCTCTTGAACTAGACTTGTGGAATACAGATGTGTTTGATCAATATGCCAAATCTGATCATTGGGTTCAGCTGGATAAGTTCAGGATAACAATTGGGCAGCCCCAAGTACAGTTTTGTGAAGAGAGAAGCTTAGCTTTTAGTGGAAGATTTGTTCTAAGAGGAAATCCAGTTTCTCTACCACCAAATACCTTAGAGCTGCATTTGGATGACTGTGCTGATATTAAGAATCTAAGCATGTGCCTAGTGAATGTGACACAATTGAAATCCTGTAAAATCAGGTGGTGCGATGACATCGTATGCATAATTGAGTCAGAGGAAGAGGAAAATACTTTATCCATGTTAGAAAGGATGGAACTTTTAGTTCTAGGAAACTTGAAGATGATATGTAGGGACGTAGTGAGACCTGGCACTCTTATGAGCTTGAAGAGCATTACTGTGGAATACTGTCCAAAACTGAAGACTCTATTCTCAGGGCAGATTTTACTTCAACTTAAGAATCTCGAAGAAATTAGTGTCCGCAGTTGTACTGGTATGGAGTATGTGATGCAAGAAGAAGAGGGAGATTTCATGGGAGGTAATAATTTTGGAATTGAGTTTCCGAAGTTGAAGAGGATGAAACTGAAATTCATGCCCCTTTTGATGAGTATATATGATGGAACCATTATCTGCCCTTCTTTGAGAAGTCTTGAAATAGCATCCTGTGAAGCCTTAAAAAGGCTTCCTCTTGATCCGTTAACAACGCCTGCTCTTGAAGAAATCAAAGCAACCAGAACATGGTGGAACTCATTAGAGTGGGATCAACCTGATTTTAAAAATGCCCTGCAACCTTTCCTTATTGAAATTAGATTGACAAGTACGAGTGATAGATAA 2484 0.4034 MECATTLKSLTRILECLSRESVKRIGVYGMGGVGKTTIMTEINNRLLEGRDFDLVMWVSAPKEPSLAKLQKGIGEKLDLDLSMIDDDVTRAAKLFEALNRRRKYALILDDLWEPFSLETVGIPIPTVENGCKLVITTRLLSVCRGMETDEDVEVKALQDDEAWDLLRYKVGPVVSNSAEVEVIAKEVTRECGGLPLAIVTVGRALRNAADVSEWECALDELRASTANIERMEEAVFAHLRFSYAKLKDDTSRSCFLFCALYPESHQIDTNELMEYWMWEGLLGYVGRMAAIKRRGKMILNELKHACLLEGLTQNAVEFVRMHDLIRDMAITIMRTSPHCISKAGTRMTKHQWMEEWAEDVQRVSLMRNDLKYIPFNYNLMCPRLTSLLLQFNSFSENISHEFFENMQFLKVLDLSYTGIDFLPNSVSNLENLSALLLSNCWNLSTVPSLAKLNKLMVLDLSCSPRMKELPNGMQNLGNLRRLNLSKTGIEIFPFGLISKYTLLEDLLIGGCGSLWGSMTVKAISGGASIEEVISSNLSSLELDLWNTDVFDQYAKSDHWVQLDKFRITIGQPQVQFCEERSLAFSGRFVLRGNPVSLPPNTLELHLDDCADIKNLSMCLVNVTQLKSCKIRWCDDIVCIIESEEEENTLSMLERMELLVLGNLKMICRDVVRPGTLMSLKSITVEYCPKLKTLFSGQILLQLKNLEEISVRSCTGMEYVMQEEEGDFMGGNNFGIEFPKLKRMKLKFMPLLMSIYDGTIICPSLRSLEIASCEALKRLPLDPLTTPALEEIKATRTWWNSLEWDQPDFKNALQPFLIEIRLTSTSDR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4876g00008 827 Pfam NB-ARC domain 9 244 IPR002182 GO:0043531
Pral4876g00008 827 FunFam Probable disease resistance protein At1g61300 4 151 - -
Pral4876g00008 827 FunFam Probable disease resistance protein At1g63360 243 331 - -
Pral4876g00008 827 SUPERFAMILY L domain-like 320 781 - -
Pral4876g00008 827 FunFam Probable disease resistance protein At5g66910 156 242 - -
Pral4876g00008 827 Gene3D Ribonuclease Inhibitor 331 569 IPR032675 -
Pral4876g00008 827 Gene3D - 4 156 IPR027417 -
Pral4876g00008 827 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 12 787 - -
Pral4876g00008 827 Pfam Leucine rich repeat 382 440 IPR001611 GO:0005515
Pral4876g00008 827 Gene3D - 243 330 IPR036388 -
Pral4876g00008 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 258 IPR027417 -
Pral4876g00008 827 Gene3D - 157 242 IPR042197 -
Pral4876g00008 827 PRINTS Disease resistance protein signature 191 205 - -
Pral4876g00008 827 PRINTS Disease resistance protein signature 24 39 - -
Pral4876g00008 827 PRINTS Disease resistance protein signature 450 466 - -
Pral4876g00008 827 PRINTS Disease resistance protein signature 98 112 - -
Pral4876g00008 827 Gene3D Ribonuclease Inhibitor 674 802 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4876g00008 Pral-Chr4876 86346 88831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4876g00008 22 484 WRKY Transcription Factor Family AT5G45050 22.269 1.49e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4876g00008 K13459 - qsa:O6P43_012576 982.245