Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4875g00004 ATGATGAAGATAGGAAGATGGAATACGTGGGAAGAGCTATTGTTGGGTGGAGCAGTTCTTCGTCATGGAACTCAAAATTGGCACATCGTTGCTTCAGAACTCCAAACTCGAACTCCCTCTTACGTTTTTACTCCTCAGGTTTGTAAGGCTAAGTATGAAGATTTAAAAGAGCAATATTCTGCGGCTTGCTCGACTTGGTTTGAGGAGCTTACAAAGAAAAGAGTAGCAGAGTTGAAGAGAGCTTTGGAACTCTCTGAAAATTCAATTGGCTTTCTGGAATCAAAAATTAAATCCCTCAAGCCTGAGACCAACAAGAAAGAAAGCGATAATTCTTGCGGTGGGCAAAATAATAATAATAATTATTGCACAGAAGAGACGATACCAAAAGATCATGAGTTATCTTCTGGGAGTTTCACGCACAGAAACACAGAAAACTTCTCTCCTGAGGCTGAGAATCAAGAGATCATGTTAGAGACAAAGCCTGCTGGAGTTGCAGGCTGTTGTCATGAGTACGAGAAAGCTTCAAATAGTGCAGCAGACTTGTCGGCATGTTATTGTTCTGCCAACGTAGGACAATTTCAATGGAGTAATCTGAAGACGAGGAGTGGGAAGAGGAAGAGGAAGGATTATAGCAGCTCAAGTTCACTCACACTTGGCAGTGTGAGGGACAGTGAGTCTTTGTCGGACACAACTTCATCAGATGACAATGATGATGTCGTGTCTGGTTTTGAAGAATTTTCAACCAGCAACAACTGTAATAATCAAAGTTTAAACGACGAAGTGGAATACTTGCTCTCCATTTTCGACTCTATGGTGGAAAATAAAGCTGCTTCTGTTTTTAAACATCGCTTGTATAGTCAGAAGACACGCAGGTACGAGAAGATGATCAGGAGGCACATGGATTTGGATGCCATAAGATACAGAATCAGCACCAGAACCATAAAATCAAGAACGGAGCTTTTCGTAGACCTACTTGTTCTCACCAACAATGCTCTTGTCTTCTACCCCAAGACCACTGGTGAGTACCAATCTGCCCTAATTCTCAGAGACCTTGTAACCCAGAAACTCAGTAACTCACTCGATCTTCAAGATTTTACGATCAAATCATCATCCGTAGCGACCCAAAAGTATAATCATCATAAGGTCTCTGAAAAAATATCGATGGACACAGCTTCAAAGAAATACTGA 1188 0.4133 MMKIGRWNTWEELLLGGAVLRHGTQNWHIVASELQTRTPSYVFTPQVCKAKYEDLKEQYSAACSTWFEELTKKRVAELKRALELSENSIGFLESKIKSLKPETNKKESDNSCGGQNNNNNYCTEETIPKDHELSSGSFTHRNTENFSPEAENQEIMLETKPAGVAGCCHEYEKASNSAADLSACYCSANVGQFQWSNLKTRSGKRKRKDYSSSSSLTLGSVRDSESLSDTTSSDDNDDVVSGFEEFSTSNNCNNQSLNDEVEYLLSIFDSMVENKAASVFKHRLYSQKTRRYEKMIRRHMDLDAIRYRISTRTIKSRTELFVDLLVLTNNALVFYPKTTGEYQSALILRDLVTQKLSNSLDLQDFTIKSSSVATQKYNHHKVSEKISMDTASKKY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4875g00004 395 Gene3D - 2 54 - -
Pral4875g00004 395 CDD Bromodomain 262 356 - -
Pral4875g00004 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 39 IPR017930 -
Pral4875g00004 395 MobiDBLite consensus disorder prediction 212 240 - -
Pral4875g00004 395 MobiDBLite consensus disorder prediction 102 121 - -
Pral4875g00004 395 Coils Coil 75 95 - -
Pral4875g00004 395 MobiDBLite consensus disorder prediction 204 240 - -
Pral4875g00004 395 SMART bromo_6 257 361 IPR001487 GO:0005515
Pral4875g00004 395 CDD SANT 6 56 IPR001005 -
Pral4875g00004 395 Gene3D - 247 358 IPR036427 GO:0005515
Pral4875g00004 395 SUPERFAMILY Homeodomain-like 5 42 IPR009057 -
Pral4875g00004 395 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 6 231 - -
Pral4875g00004 395 SUPERFAMILY Bromodomain 249 363 IPR036427 GO:0005515
Pral4875g00004 395 ProSiteProfiles Bromodomain profile. 272 342 IPR001487 GO:0005515
Pral4875g00004 395 Pfam Bromodomain 266 345 IPR001487 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4875g00004 Bromodomain 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4875g00004 - - gmx:100804245 255.758