Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4873g00023 ATGAATCCGAATGCAGATAATGGACACAGGGCTAGGAAGCCTCCCGAGTTCGAGGAAGATTTTGTAGAGAAAGATCCTACAGCCCTCTATATTCGGTACAATGAAATCTTGGGCAGGGGTGCTTTCAAGACTGTTTATAGGGGATTCGACGAAGTTAATGGGATAGAAGTCGCTTGGAACCAAATTAGGATTGATGATCTCCTCCAGTCAGCAGAAGATCTATCAAAATTATATTCTGAAGTTCATCTTTTGAAGTCTTTGAAGCATGAAAATATCATTAAGTTCTATAATTCGTGGATTGATGACCAGAAGAAAACTGTTAACATGATCACTGAGCTCTTCACCTCTGGAAATTTGAGGCAATACCGGGAGAAGCATAGATATGTTGACATGAAGGCTATAAAGAATTGGGCTAGACAGATTCTTCGAGGCTTGGCATATCTACATGGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAGGCGAAAATAGGGGAGCTTGGCCTGGCAATTATCTTGAAGCAGTCGACAGCTCACAGTGTCATTGGCACTCCCGAGTTTATGGCTCCGGAGTTATATGAAGAGGAGTACAATGAACTTGTTGACATTTATTCTTTTGGGATGTGCATATTAGAGATGGTTGCTTTAGAGTATCCATATATTGAGTGCAAAAGTCCTGCTCAGATCTTCAAGAAGGTTACTTGTGGCATCAAGCCTGCTTCGCTTAGTAAAGTGAAGGACTCTCAAGTTAAGGAGTTTATTGAAAAATGCATTGTTTCAGCCTCTCAGAGATTGTCTGCAGAGGAGCTTCTCAAAGATCCATTTCTCCAAGTCGATGAGAGTCCAAGGGAACCAATCCCTGATCTTCTGGATTTATCTTGTCAAGCCCCAAAAGCTGTGGATTTGTCTAAGTCCGATCCTCTCTCTACGGACATGGATGTTGAATACAAACAGATTTCCGGGAGTGTGAACACAGAAAGTAACTCTGGAAGTCCACCACATAGTCCCGTTATAGAATTTCAGAGGACACTTGAGAACAACGAATTTAGGTTAAAAGGGACGAAAAATGATGATACCTCAATGTCATTGACATTGCGTATAGCTGATTCAGATGGTCGAGCAAAGAATATACTTTTTCTCTTTTACCTTGATTCAGATACTGCACTCTCTGTTGCCTCAGAGATGGGTGAACAATTAGAGTTGGCCAATCATGATGTTGTCTTCATAGCTGAGCTTATTGATTACTTGATAATGAGACTTATGCCTGAGTGGAAGACCTCTTCTGATTATTCCTCGTGTGGAGGAGCAAGTCTGAATGGTGAGTCTCCGATACCTGGGGATGGACGAACTGTAACAACATGCGCATGGGATTCTATTCCAGATAATGTTCCCTCTGGACGGATCGCTAGGATCTGCTGCTTCCGAGACAGCTGTGGAAAGCACGTCTTTGCAAAGCTTACGAGGAGGTACATATTTCGAGCAGAGCAGTAA 1527 0.4231 MNPNADNGHRARKPPEFEEDFVEKDPTALYIRYNEILGRGAFKTVYRGFDEVNGIEVAWNQIRIDDLLQSAEDLSKLYSEVHLLKSLKHENIIKFYNSWIDDQKKTVNMITELFTSGNLRQYREKHRYVDMKAIKNWARQILRGLAYLHGHKPPIIHRDLKCDNIFVNGNQGEAKIGELGLAIILKQSTAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVALEYPYIECKSPAQIFKKVTCGIKPASLSKVKDSQVKEFIEKCIVSASQRLSAEELLKDPFLQVDESPREPIPDLLDLSCQAPKAVDLSKSDPLSTDMDVEYKQISGSVNTESNSGSPPHSPVIEFQRTLENNEFRLKGTKNDDTSMSLTLRIADSDGRAKNILFLFYLDSDTALSVASEMGEQLELANHDVVFIAELIDYLIMRLMPEWKTSSDYSSCGGASLNGESPIPGDGRTVTTCAWDSIPDNVPSGRIARICCFRDSCGKHVFAKLTRRYIFRAEQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4873g00023 508 SUPERFAMILY Protein kinase-like (PK-like) 34 332 IPR011009 -
Pral4873g00023 508 Gene3D - 371 452 - -
Pral4873g00023 508 FunFam probable serine/threonine-protein kinase WNK9 114 293 - -
Pral4873g00023 508 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 442 - -
Pral4873g00023 508 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4873g00023 508 Gene3D Phosphorylase Kinase; domain 1 15 112 - -
Pral4873g00023 508 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4873g00023 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Pral4873g00023 508 FunFam Probable serine/threonine-protein kinase WNK1 16 112 - -
Pral4873g00023 508 Gene3D Transferase(Phosphotransferase) domain 1 114 293 - -
Pral4873g00023 508 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4873g00023 508 CDD STKc_WNK 30 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4873g00023 Pral-Chr4873 136113 138991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4873g00023 18 443 MAP Kinase Kinase Kinase AT5G41990 59.155 2.50e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral4873g00023 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4873g00023 K08867 - qsa:O6P43_027404 694.886