Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4873g00021 ATGATCACTGAGCTCTTCACCTCTGGAAATTTGAGGCAATACCGGGAGAAGCATAGATATGTTGACATGAAGGCTATAAAGAATTGGGCTAGACAGATTCTTCGAGGCTTGGCATATCTACATGGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGAGAGGCGAAAATAGGGGAGCTTGGCCTGGCAATTATCTTGAAGCAGTCGACAGCTCACAGTGTCATTGGCACTCCCGAGTTTATGGCTCCGGAGTTATATGAAGAGGAGTACAATGAACTTGTTGACATTTATTCTTTTGGGATGTGCATATTAGAGATGGTTGCTTTAGAGTATCCATATATTGAGTGCAAAAGTCCTGCTCAGATCTTCAAGAAGGTTACTTGTGGCATCAAGCCTGCTTCGCTTAGTAAAGTGAAGGACTCTCAAGTTAAGGAGTTTATTGAAAAATGCATTGTTTCAGCCTCTCAGAGATTGTCTGCAGAGGAGCTTCTCAAAGATCCATTTCTCCAAGTCGATGAGAGTCCAAGGGAACCAATCCCTGATCTTCTGGATTTATCTTGTCAAGCCCCAAAAGCTGTGGATTTGTCTAAGTCCGATCCTCTCTCTACGGACATGGATGTTGAATACAAACAGATTTCCGGGAGTGTGAACACAGAAAGTAACTCTGGAAGTCCACCACATAGTCCCGTTATAGAATTTCAGAGGACACTTGAGAACAACGAATTTAGGTTAAAAGGGACGAAAAATGATGATACCTCAATGTCATTGACATTGCGTATAGCTGATTCAGATGGTCGAGCAAAGAATATACTTTTTCTCTTTTACCTTGATTCAGATACTGCACTCTCTGTTGCCTCAGAGATGGGTGAACAATTAGAGTTGGCCAATCATGATGTTGTCTTCATAGCTGAGCTTATTGATTACTTGATAATGAGACTTATGCCTGAGTGGAAGACCTCTTCTGATTATTCCTCGTGTGGAGGAGCAAGTCTGAATGGTGAGTCTCCGATACCTGGGGATGGACGAACTGTAACAACATGCGCATGGGATTCTATTCCAGATAATGTTCCCTCTGGACGGAGTACTGATCAAAAGGCTTTGTGTGACAATGTTGATAATGCCGATTTTCAGACTTATTTTTCTTCTGCTCTTGGTTTGACTAACTTGGAAGATCAACAGTCGCTAGGATCTGCTGCTTCCGAGACAGCTGTGGAAAGCACGTCTTTGCAAAGCTTACGAGGAGGTACATATTTCGAGCAGAGCAGTAACAATGTTGAAGTGGACATAGTGATCAGTAAATTCAGAGAGAACACAAGAAAAAGATGCTGA 1362 0.4229 MITELFTSGNLRQYREKHRYVDMKAIKNWARQILRGLAYLHGHKPPIIHRDLKCDNIFVNGNQGEAKIGELGLAIILKQSTAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVALEYPYIECKSPAQIFKKVTCGIKPASLSKVKDSQVKEFIEKCIVSASQRLSAEELLKDPFLQVDESPREPIPDLLDLSCQAPKAVDLSKSDPLSTDMDVEYKQISGSVNTESNSGSPPHSPVIEFQRTLENNEFRLKGTKNDDTSMSLTLRIADSDGRAKNILFLFYLDSDTALSVASEMGEQLELANHDVVFIAELIDYLIMRLMPEWKTSSDYSSCGGASLNGESPIPGDGRTVTTCAWDSIPDNVPSGRSTDQKALCDNVDNADFQTYFSSALGLTNLEDQQSLGSAASETAVESTSLQSLRGGTYFEQSSNNVEVDIVISKFRENTRKRC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4873g00021 453 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 391 - -
Pral4873g00021 453 Gene3D Transferase(Phosphotransferase) domain 1 6 185 - -
Pral4873g00021 453 FunFam probable serine/threonine-protein kinase WNK9 6 185 - -
Pral4873g00021 453 Pfam Protein kinase domain 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4873g00021 453 Gene3D - 263 344 - -
Pral4873g00021 453 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4873g00021 453 SUPERFAMILY Protein kinase-like (PK-like) 1 181 IPR011009 -
Pral4873g00021 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Pral4873g00021 453 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4873g00021 Pral-Chr4873 136112 139423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4873g00021 23 330 MAP Kinase Kinase Kinase AT1G49160 56.037 3.48e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral4873g00021 Pkinase 4.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4873g00021 K08867 - jre:108986606 539.265