Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral486g00012 ATGGCCACGGGTTGGAGATGGTGCTATGTCATCCTAGTCATTCTACTGCTTGCTCCGTTCGTGGCTTCTTCACGTTCAGTTATCAGGAATTTACCTGGCTTTTCTGGTGACCTCCCATTCAAACTTGAAACTGGATACATAGGAGTGGGAGAAGAAGAGGAAGTGCAATTATTTTACTTATTTGTGGAGTCTCAAAGAAATCCCTCGAAAGATCCAATCTTACTTTGGTTTGTTGGAGGCCCTGGTTGCTCTGCGCTTTCTGCATTTCTTTTTGAAAATGGACCAGTAACAGTTGACCGCAGTTCCAGTGGGGTTCTTCCAACACTTGTATTAAACCCCTACGCTTGGACGCAGGTACTCAATGTCATGTACATAGATTTACCGGTTGGCACAGGATTTTCTTATTCGAAAACACAAGAAGGCTACCATAGCAGTGATATGCTGTGGATTGAGAATACATATGATTTTCTACAGAAGTGGTTTATTAATCATCCTGAGTTTGGCTCAAATCCATTTTACATTGGTGGTGGATCGTATTCAACTATGCCAACTGTTCCTCTTGTTAAAAAAATATATGAAGGTTACAGAGAAGGAAGCAATCCGCTCATAAATATCAAAGGTTTTGTGCTTGCCAGCCCAGCAACTGATGCGTTTCTTGACTTCAACTCACAAGTTGTTTATGCACACCAGATGAGTCTTATATCGGATGAGCTCTATGAGTCAATGAAGGCAAGTTGTAATGGTGATTATCTCAACATAAATCCAAACAACACAAAGTGTGTCTCAGATTATGAGGAATACTCTCGTCTGATTCGCTACATATACCTAAATCAAATTTTGGAACCTGTTTGCATTACGACTCCCAATGACAATGAAAGAATTCTCTTGGAAGATCCATCAGAAGGGATCCTCCAGTCGTTGCAGAACCTTTCAGCATTCTGGTGTCGTGGATATGACCACATGCTTGTTAACCAATGGGCAAATAATGAGGATGTTAGGAAGGCTCTTCAGATTAGAGAGGGAACTAAAGGGGAGTTCTTGAGATGCAACATGAGTTTATCATACAAAACTCATCTACAAAGTGTTGTTGATTATCATCGCATGCTCACTAAGACAAACCTTCAATGTCTTGTATACACTTCTGATCTTGACCTGGCAATACCACATATTGGTACACAAGCTTGGATAAAGTCACTGAACTTGAAAATAGCTGATCCTTGGCGTGCATGGTTTGTTGATGGTCAAGTTGCCGGATACACACAAATCTACAAGAACCATGAGTACTTCTTGACATATGTTGCCGTGAAAGGTGCGGGTCATGTAGCCCAATCATTTAAACCTAAAGAAGCTTTCCAAATGATAGACAGGTGGTTCTCATATGCTCTTATTTAA 1392 0.408 MATGWRWCYVILVILLLAPFVASSRSVIRNLPGFSGDLPFKLETGYIGVGEEEEVQLFYLFVESQRNPSKDPILLWFVGGPGCSALSAFLFENGPVTVDRSSSGVLPTLVLNPYAWTQVLNVMYIDLPVGTGFSYSKTQEGYHSSDMLWIENTYDFLQKWFINHPEFGSNPFYIGGGSYSTMPTVPLVKKIYEGYREGSNPLINIKGFVLASPATDAFLDFNSQVVYAHQMSLISDELYESMKASCNGDYLNINPNNTKCVSDYEEYSRLIRYIYLNQILEPVCITTPNDNERILLEDPSEGILQSLQNLSAFWCRGYDHMLVNQWANNEDVRKALQIREGTKGEFLRCNMSLSYKTHLQSVVDYHRMLTKTNLQCLVYTSDLDLAIPHIGTQAWIKSLNLKIADPWRAWFVDGQVAGYTQIYKNHEYFLTYVAVKGAGHVAQSFKPKEAFQMIDRWFSYALI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral486g00012 463 FunFam Carboxypeptidase 314 462 - -
Pral486g00012 463 Pfam Serine carboxypeptidase 32 459 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 FunFam Serine carboxypeptidase-like 19 21 290 - -
Pral486g00012 463 SUPERFAMILY alpha/beta-Hydrolases 28 459 IPR029058 -
Pral486g00012 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 447 IPR001563 GO:0004185|GO:0006508
Pral486g00012 463 Gene3D - 315 461 - -
Pral486g00012 463 Gene3D alpha/beta hydrolase 22 295 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral486g00012 Pral-Chr486 77557 84056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral486g00012 322 459 Calmodulin-binding Proteins AT2G22960 42.754 1.04e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral486g00012 K16296 - qsu:112035786 523.472