Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4869g00018 ATGGGGAATTGTTGTAGTAACAATGTTCCTCGTCCATATTCAATGGAAAAAGAGGTGAATGAGACAGAATTTGAGCATGGAGAGGACCATAGTTCCATTTCCACATATAGTGAAGGTGAAGGGCGAGTCAGGCTAAGAGGACACTCTAGGCTTGTGTCAATGTACAGCCAGCAGGGAAGAAAAGGGGTCAATCAAGATGCAATGACAGTTTGGGAGGACTTCACTGGAGAAAAAGATATGATCTTTTGTGGTGTGTTCGATGGTCACGGTCCTTATGGGCACGTGGTTGCTCGATATGTACGCAAACGTCTACCCTCAAAGCTTTCTGCAGCAATCAAGATGTCAAAGCAAAAGATATGCATGTATAATGATGCAAATGCTGCTGCAGAAGGTGGAAATCATCAAACATTGTCCCTTGCTTCATGGGAGAACACCTTCTTGAAATCCTTCAACGAGATGGATCAAGCCATTGCTCAGGACATTAACACCGACAGTTTTTACAGCGGTAGCACTGCTGTAACTGTAATCAAACAGGGTGACCAGCTGATAATTGGCAATTTGGGTGACTCTCGTGCGGTTCTTTGCACGAGAGGAGCTAGAGATCAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCAGATATTCCAAGTGAAGCTGAAAGAATCCGTAGCTGTGAAGGCAGAATTTTCGCTGAAGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCGGATGAAGACTGCCCTGGACTAGCAATGTCAAGAGCCTTTGGGGACTTCTGCTTAAAAGATTATGGCCTCATCTCAGCTCCCGATGTCTTCTATCGCAGATTAACCAAGCAGGATGAATTTGTGGTTCTGGCTACTGATGGGGTTTGGGATGCACTGACAAATGATGAAGTTATAGAAATAGTTGCTTCAGCACCAAGGAGGTCCAGAGCAGCGAGATTGTTAGTGAAGAGAGCTGTGCAGGCATGGAGGCGCCGAAGGAAGAATCACTATGAATCTGCTAGAAATGAAGACACCACAAGCGTAGATAGTTCAATGTCGAAGGATGAATGGGTAGCTCTTAAAGGGTTGTCCAGAGCCAACACCATATCGAAATTTACTGGCCTCATCAGGGATGTGAGCAGAAGGGATCCATCTGAGTTTCTTGAGGGTGTTCAAGTTCTCTAG 1179 0.4512 MGNCCSNNVPRPYSMEKEVNETEFEHGEDHSSISTYSEGEGRVRLRGHSRLVSMYSQQGRKGVNQDAMTVWEDFTGEKDMIFCGVFDGHGPYGHVVARYVRKRLPSKLSAAIKMSKQKICMYNDANAAAEGGNHQTLSLASWENTFLKSFNEMDQAIAQDINTDSFYSGSTAVTVIKQGDQLIIGNLGDSRAVLCTRGARDQLIPVQLTVDLKPDIPSEAERIRSCEGRIFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRRLTKQDEFVVLATDGVWDALTNDEVIEIVASAPRRSRAARLLVKRAVQAWRRRRKNHYESARNEDTTSVDSSMSKDEWVALKGLSRANTISKFTGLIRDVSRRDPSEFLEGVQVL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4869g00018 392 PANTHER PROTEIN PHOSPHATASE 52 333 IPR015655 GO:0004722|GO:0006470
Pral4869g00018 392 ProSiteProfiles PPM-type phosphatase domain profile. 51 350 IPR001932 -
Pral4869g00018 392 Pfam Protein phosphatase 2C 64 324 IPR001932 -
Pral4869g00018 392 Gene3D - 44 345 IPR036457 -
Pral4869g00018 392 CDD PP2Cc 50 329 IPR001932 -
Pral4869g00018 392 SMART PP2C_4 42 349 IPR001932 -
Pral4869g00018 392 SUPERFAMILY PP2C-like 47 327 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4869g00018 Pral-Chr4869 135699 138077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4869g00018 1 330 PP2C-type Phosphatase Gene Family AT5G01700 52.226 9.59e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4869g00018 - - gmx:100783603 491.886