Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4869g00008 ATGAAGCAGGTGGTAGGAACGGTGGTGTCAAACAAGATGCAGAAATCAGTGGTGGTGGCAGTGGATAGGTTATTCCATCACAAATTATACAATCGATACATCAAACGCACATCTAAATTTATGGCACATGACGAGAACAATGTCTGTAACATCGGTGATCGAGTTAGACTTGATCCTTCTAGGCCTTTGAGTAAGCGTAAGCATTGGACTGTTGCTGAAATTATTAAGAAAGCAAGAATTTATGTTCCACCATCTGCACCTGTGACTAAAGAGCCAAGTCCCAGCTCCGAAGCGCCTGCTTCCTAG 306 0.4346 MKQVVGTVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDENNVCNIGDRVRLDPSRPLSKRKHWTVAEIIKKARIYVPPSAPVTKEPSPSSEAPAS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4869g00008 101 Gene3D - 1 93 IPR012340 -
Pral4869g00008 101 FunFam 30S ribosomal protein S17 1 100 - -
Pral4869g00008 101 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 80 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 SUPERFAMILY Nucleic acid-binding proteins 2 90 IPR012340 -
Pral4869g00008 101 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pral4869g00008 101 NCBIfam 30S ribosomal protein S17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4869g00008 Pral-Chr4869 46543 48346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4869g00008 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 40.845 8.00e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4869g00008 K02961 - pop:18107889 166.392