Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4869g00007 ATGAGCACTCCTTGCTGCTTCTTCTTGTTACTGTTCCTCTTTCCTCAGCTCTCTTTCTCTCTCTCTTCCGATGGGCTCGCCCTTTTGTCTCTCAAATCAGCCATTGACCAGCCTCCTGGAGCCTCGGCCTTCCCCGACTGGAATGATGGTGACGCCACTCCTTGTCAGTGGTCTGGAATCTCCTGCATGAACGTCTCCGGCTCCTCGGAGCCTCGCGTCGTTGGACTCACTCTTTCTGGTAAGAATCTCCGGGGGTATATTCCTTCTGAGCTCGGAAGCTTGGGGTATCTTCGCAGGCTCAATCTGCACAGCAACAATTTCTACGGTTTTATTCCTGTTCAGCTCTTCAATGCCTCTTCGCTGCACAGTCTTTTTCTCTACGGTAACAACCTCTCCGGCCCTTTACCTCCTTCGATCTGCAACATCCCCCGGCTTCAAAACGTTGATCTCTCCAATAACTCCATCTCGGGTAACATTCCTGGGGAACTCAAGAACTGCAAGCAGTTGCAAAGACTGATTCTTGCTGGGAACAAGTTTTCTGGGGAGATACCTAAAGGTGTGTGGTCGGAGTTAGATAATTTGGTTCAATTGGACCTTTCTGCCAACGAGCTGGACGGGCCGATTCCGGACGATATTGGCGAACTGAAATCTCTATCGGGTACGCTCAACCTTTCTTTTAATCACTTGTCTGGTAAAATTCCGAAATCGCTGGGGAATTTGCCAGTTGCAGTGAGCTTTGATCTTCGGAATAACAATCTAACCGGGGAGATACCCCAAACGGGGTCGTTCGCTAACCAGGGTCCTACCGCATTTCTGAACAATCCGCAGCTATGTGGATTTCCCCTCCAGAAATCTTGCGGTAATTCGAACCAGGGCTCCTCGGGGAGTCCAAGTTCATCTCGGGAATCCGACAACCACTCGAGGAATGGCCTTAGTCCTGGTTTGATCATACTAATTTCAGCGGCTGACGCTGCTGCGGTTGCGTTGATTGGCCTTGTAGTTGTGTACATTTATTGGAAAAAGAAGGACGACTCCAATGGATGTAGCTGCACAGGGAAGAGCAAGTTTGGCGGGAATGAGAAAGGACATATTTGTTCCTTCCCATGCATCAGTGGTCTAAAAAGTGATGACTCTGAAATAGAGGAACCTGAAAAGGCAGAGGATGGCAGAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGTTTCAACTTCGAGCTCGATGAACTTCTCCGGGCTTCGGCTTATGTATTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTTCTCGGAAATGGGGTGCCTGTGGCTGTTAGAAGACTCGGAGAGGGTGGTGAACAGAGGTATAAGGAGTTTGCGGCAGAGGTTCAGGCCATTGGGAAGGTGAAGCACCCTAACGTTGTAAAGCTGAGAGCTTATTATTGGGCGCCAGACGAAAAGCTTCTGATCAGTGATTTCATCTCCAATGGCAATCTGGCCACTGCTCTTCGAGGAAGAAATGGTCAGCCGTCTCCGAATCTTTCATGGTCAACGAGGCTAAGAATTGCCAAAGGAACAGCTAGGGGGTTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTCGTTCATGGTGACATAAAACCCTCTAACATTCTACTTGACAACGACTTTCACCCTTACATCTCTGACTTCGGCCTCAATCGCCTCATCACCATCACTGGAAATAATCCTTCCTCTGGCGGCTTCATGGGCGGAGCTCTTCCATACATGAAACCATCTCAAACAGAGCGAACCAACAATTACAAGGCCCCTGAAGCAAGAGTCCCTGGCTGCAGACCAACCCAGAAATGGGACGTCTATTCATTCGGAGTTGTTTTGCTTGAACTTCTTACTGGGAAATCCCCAGAGTCATCTCCGGCAGCATCAACTTCTGTGGAAGTTCCTGACTTGGTAAGATGGGTGAAGAAAGGGTTTGAAGAAGAAAGTCCATTATCAGAAATGGTTGATCCATCCCTGCTCCAAGAAGTTCATGCCAAGAAAGAGGTTCTAGCTGTGTTTCATGTAGCACTAGCTTGCACTGAGGGAGACCCTGAGGTTCGGCCCAGAATGAAATCTGTCTCTGAAAATCTTGAAAGGATCGGGTCATGA 2127 0.4885 MSTPCCFFLLLFLFPQLSFSLSSDGLALLSLKSAIDQPPGASAFPDWNDGDATPCQWSGISCMNVSGSSEPRVVGLTLSGKNLRGYIPSELGSLGYLRRLNLHSNNFYGFIPVQLFNASSLHSLFLYGNNLSGPLPPSICNIPRLQNVDLSNNSISGNIPGELKNCKQLQRLILAGNKFSGEIPKGVWSELDNLVQLDLSANELDGPIPDDIGELKSLSGTLNLSFNHLSGKIPKSLGNLPVAVSFDLRNNNLTGEIPQTGSFANQGPTAFLNNPQLCGFPLQKSCGNSNQGSSGSPSSSRESDNHSRNGLSPGLIILISAADAAAVALIGLVVVYIYWKKKDDSNGCSCTGKSKFGGNEKGHICSFPCISGLKSDDSEIEEPEKAEDGRGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNVVKLRAYYWAPDEKLLISDFISNGNLATALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPYISDFGLNRLITITGNNPSSGGFMGGALPYMKPSQTERTNNYKAPEARVPGCRPTQKWDVYSFGVVLLELLTGKSPESSPAASTSVEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHAKKEVLAVFHVALACTEGDPEVRPRMKSVSENLERIGS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4869g00007 708 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 166 706 IPR046959 -
Pral4869g00007 708 SUPERFAMILY Protein kinase-like (PK-like) 416 703 IPR011009 -
Pral4869g00007 708 Pfam Protein kinase domain 416 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4869g00007 708 Pfam Leucine rich repeat 143 204 IPR001611 GO:0005515
Pral4869g00007 708 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pral4869g00007 708 Gene3D Transferase(Phosphotransferase) domain 1 487 708 - -
Pral4869g00007 708 CDD STKc_IRAK 417 706 - -
Pral4869g00007 708 SUPERFAMILY L domain-like 21 283 - -
Pral4869g00007 708 FunFam Leucine-rich repeat receptor-like protein kinase 21 185 - -
Pral4869g00007 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Pral4869g00007 708 MobiDBLite consensus disorder prediction 288 307 - -
Pral4869g00007 708 ProSiteProfiles Protein kinase domain profile. 411 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4869g00007 708 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 708 - -
Pral4869g00007 708 Gene3D Ribonuclease Inhibitor 190 288 IPR032675 -
Pral4869g00007 708 Gene3D Ribonuclease Inhibitor 20 189 IPR032675 -
Pral4869g00007 708 Gene3D Phosphorylase Kinase; domain 1 399 486 - -
Pral4869g00007 708 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Pral4869g00007 708 SMART serkin_6 415 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4869g00007 708 FunFam Leucine-rich repeat receptor-like protein kinase 193 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4869g00007 Pral-Chr4869 35041 39731 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4869g00007 18 706 Receptor kinase-like Gene Family AT1G67510 73.333 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4869g00007 Pkinase 3.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4869g00007 - - qsa:O6P43_023877 1152.5