Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4869g00005 ATGGGAAACAATAATCGGTTTGCCGAAAAGTTTCCCACAAATGAAGGAAGACCCGTTTCTCGTTTCTTCGTCTCCCTCATTATGGTTCTTCAAGTTCTGGCATTTACGTTTCAACCAGTCTCAGGAGGCCATTCGTGGGATGGTGTGATTGTTACACAAGCCGATTATCAGGCTCTGCGAGCTATAAAGCGAGAATTCATCGATTTCAGAGGAGTTCTGAGGAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTGGGTGGGCAGGAATCAAGTGCGTGAAGGGACAGGTTATTGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTCGAATTTCCGAGAAAATCGGATCGCTTCAAGCTCTTAGGAAGCTGAGTCTACACGACAATGTACTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAATCTACCTCTTCAACAATAGGCTTTCAGGTTCTGTCCCTCCTTCCATTGGCAGGAATAGCCCACTGCTTCAGTCTATTGATTTTAGCAATAACTCGCTCTCAGGTACTATCCCTCCTAGCTTAGTAAACTCTACTAGATTATACAGACTCAATTTGAGCTTTAACTCTCTTTCTGGCTCTATTCCTAGAACTTTCACTATGGTTCCTTCTTTAACTTTTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCATGGGGTAGTGGAATGGGAAAAAACCAAACTTACAATCTTCAAATCTTGACCCTCGATCACAATCTCATTTCTGGAACCATTCCGGTTTCTTTGAGTGAGATGGGATTTCTCCAAGAGATTTCTCTTAGCCATAACCAGATGAAAGGGTCTATTCCAAGTGAGCTCGGCGGGCTTTCGAGGCTTCAAACTCTTGATCTATCAAACAATGGCATTAATGGTAGCTTCCCAGATAATTTTGACCAGTTAAAAAACCTTACTGTGCTTAACCTGCATAATAATAAGCTTGAGGGTGAAATCCCATCAACAATTGGGAACTTCTCAGTGATCACGCAGATTGACTTCTCTGAAAATAAACTCGTGGGAGAGATTCCAGATTCACTTACCAAGCTTGCAAATTTGACCTCTTTTAATGTTTCTTACAACAATCTCTCTGGCCTTGTCCCATCCCTCCTCTCCAAAAGATTCAATTCTAGCTCCTTTGCTGGGAATCTCCAACTCTGTGGGTATGTCCCTTCAAAACCATGCCCTTCTTCTTCACCCCCACCTCAGAATCCTCCATCTCCATCCCCAAAACCTTCATTGAACCCACACCACCGTAAACTAAGCACCAAGGACATAATCCTCATAGTAGCAGGTGCTCTTCTTGTCATTCTTCTTCTACTTTGCTGCGTTTTGCTTTGCTGTTTGGTCAGGAAGAGAGCAGCCGCTAAAGAAAAGAATGGGAATATTGCCAAAACATCCGCTGCTGCTGGTACTGCACGAAGTGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGTGAAGCAGGAGGGAAGCTAGTTCACTTTGATGGCCCATTTGTTTTTACGGCTGATGACCTCTTGTGCGCTACTGCTGAGATTATGGGAAAAAGCGCTTATGGAACAGCATACAAGGCAACGCTAGAGGATGGGAACCAGGTTGCTGTGAAGAGGTTGAGGGAGAAGACAACCAAAGGGCAGAAGGAGTTCGAAACTGAGGTTGCTGCACTCGGTAAAATTAGACACCCAAATCTGCTGGCACTTAGAGCATACTACATGGGACCAAAGGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGTCTAGCATCGTTCCTCCACGCTAGGGGCCCGGAAATTGTCATAGACTGGCCAACAAGGATGAGAATAGCCCTTGGAGTAACCCGCGGCCTATGCTACCTGCATACAGAAGAGAACATAGTACACGGAAATCTCACCTCAAGCAACATACTCTTGGATGAGCAGACAAATGCCCATATCACAGACTTTGGTCTCTCAAGGCTAATGACCACGTCAGCAAACAGCAACATCATAGCCACTGCAGGAAACCTTGGTTATAATGCACCAGAGCTCACAAAGACCAAGAAACCAAACACAAAAACTGATGTCTATAGTCTTGGTGTCATCATTTTGGAGCTCTTAACTGGAAAACCTCCTGGTGAACCAACCAATGGCTTGGACTTGCCACAGTGGGTTGCATCCATAGTGAAGGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAGCTATTGGCGATGAACTGCTTAATACCCTGAAATTAGCTCTTCACTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTGGAGGAGATCAAGCCAGATTCTTCTGTGGATGATGATGGAGCAAAAGCCCCAGAAACCGAGCAAAAAGCCCCAGAAACTGAGCAAACTTGA 2466 0.453 MGNNNRFAEKFPTNEGRPVSRFFVSLIMVLQVLAFTFQPVSGGHSWDGVIVTQADYQALRAIKREFIDFRGVLRSWNDSGIGACSGGWAGIKCVKGQVIAIQLPWRGLGGRISEKIGSLQALRKLSLHDNVLGGPVPWSLGFLPNLRGIYLFNNRLSGSVPPSIGRNSPLLQSIDFSNNSLSGTIPPSLVNSTRLYRLNLSFNSLSGSIPRTFTMVPSLTFLALQHNNLSGSIPDSWGSGMGKNQTYNLQILTLDHNLISGTIPVSLSEMGFLQEISLSHNQMKGSIPSELGGLSRLQTLDLSNNGINGSFPDNFDQLKNLTVLNLHNNKLEGEIPSTIGNFSVITQIDFSENKLVGEIPDSLTKLANLTSFNVSYNNLSGLVPSLLSKRFNSSSFAGNLQLCGYVPSKPCPSSSPPPQNPPSPSPKPSLNPHHRKLSTKDIILIVAGALLVILLLLCCVLLCCLVRKRAAAKEKNGNIAKTSAAAGTARSAGKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYMGPKGEKLLVFDYMTKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTEENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIKPDSSVDDDGAKAPETEQKAPETEQT 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4869g00005 821 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 247 795 - -
Pral4869g00005 821 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 52 236 - -
Pral4869g00005 821 SMART LRR_typ_2 294 317 IPR003591 -
Pral4869g00005 821 SMART LRR_typ_2 318 342 IPR003591 -
Pral4869g00005 821 SMART LRR_typ_2 366 389 IPR003591 -
Pral4869g00005 821 SMART LRR_typ_2 216 240 IPR003591 -
Pral4869g00005 821 SMART LRR_typ_2 143 167 IPR003591 -
Pral4869g00005 821 Gene3D Transferase(Phosphotransferase) domain 1 602 814 - -
Pral4869g00005 821 CDD STKc_IRAK 530 795 - -
Pral4869g00005 821 MobiDBLite consensus disorder prediction 796 821 - -
Pral4869g00005 821 Pfam Protein tyrosine and serine/threonine kinase 528 792 IPR001245 GO:0004672|GO:0006468
Pral4869g00005 821 SUPERFAMILY Protein kinase-like (PK-like) 528 797 IPR011009 -
Pral4869g00005 821 FunFam Leucine-rich repeat receptor-like protein kinase 510 600 - -
Pral4869g00005 821 Gene3D Phosphorylase Kinase; domain 1 530 601 - -
Pral4869g00005 821 MobiDBLite consensus disorder prediction 410 432 - -
Pral4869g00005 821 Pfam Leucine rich repeat N-terminal domain 54 93 IPR013210 -
Pral4869g00005 821 Gene3D Ribonuclease Inhibitor 310 414 IPR032675 -
Pral4869g00005 821 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Pral4869g00005 821 Pfam Leucine rich repeat 248 307 IPR001611 GO:0005515
Pral4869g00005 821 SUPERFAMILY L domain-like 92 402 - -
Pral4869g00005 821 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 415 - -
Pral4869g00005 821 ProSiteProfiles Protein kinase domain profile. 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4869g00005 821 MobiDBLite consensus disorder prediction 792 821 - -
Pral4869g00005 821 Gene3D Ribonuclease Inhibitor 212 309 IPR032675 -
Pral4869g00005 821 Gene3D Ribonuclease Inhibitor 52 211 IPR032675 -
Pral4869g00005 821 FunFam Pollen receptor-like kinase 1 601 806 - -
Pral4869g00005 821 MobiDBLite consensus disorder prediction 410 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4869g00005 Pral-Chr4869 26103 29350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4869g00005 44 797 Receptor kinase-like Gene Family AT3G51740 67.093 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4869g00005 PK_Tyr_Ser-Thr 8.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4869g00005 - - gmx:100819102 1165.98