Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4868g00014 ATGAACGGTTTCGGGACTTTCACAAGTAACTCAGAGGGATCCAACTCGTCATCTCACTCCGACGAAGAAGCGATCCAATTAGCGTCGGAGAAACCGAAGAAGCGAGCCGGACGCAGGGTGTTTAAGGAGACAAGGCATCCTGTGTACCGAGGAGTGCGGCGCAGGGACAAGGACAAATGGGTCTGCGAGGTTCGTGTTCCTAATAACAACAAATTAAGGATCTGGCTCGGAACTCATTCCACTCCTGAGAAAGCAGCCAGAGCCCATGACGTTGCTGCTCTCGCACTTCGTGGTAAGTCGGCTTGTCTCAATTTCGCAGACTCCGCGTGGCAGCTTCCGGTGCCGGCGTCCACAGATCCCGATGAGATACGGCGAGTGGCGATGGAGGCGGTGGAGGCCTTTGACGACGACAACGAGAACCAGCACGGCGAAGTGTGTAGCAGTATGGGGACAGTGATGGGATCAGAAGCTCACACTGGGATGAGCATGGAATTAGGAAGGCATGTGAATGGAGTTGAAGTTGGGGTTTCAGCGTTTGAAGATCAGATTTTGTTTAGCATGGCGGATGAGCCGTTGAGATCTCCGCCGGCGGCTTACTCTCTGGGAACAACCGGGTGGGACTGGAGGGAGGAATTAGGGGACCACGTGGATAATGAGGTCTCACTTTGGAGCTTTAGCATTTGA 684 0.538 MNGFGTFTSNSEGSNSSSHSDEEAIQLASEKPKKRAGRRVFKETRHPVYRGVRRRDKDKWVCEVRVPNNNKLRIWLGTHSTPEKAARAHDVAALALRGKSACLNFADSAWQLPVPASTDPDEIRRVAMEAVEAFDDDNENQHGEVCSSMGTVMGSEAHTGMSMELGRHVNGVEVGVSAFEDQILFSMADEPLRSPPAAYSLGTTGWDWREELGDHVDNEVSLWSFSI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4868g00014 227 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 ProSiteProfiles AP2/ERF domain profile. 48 106 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
Pral4868g00014 227 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 10 224 IPR045277 GO:0003700
Pral4868g00014 227 Pfam AP2 domain 47 98 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 SMART rav1_2 48 112 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 MobiDBLite consensus disorder prediction 1 23 - -
Pral4868g00014 227 MobiDBLite consensus disorder prediction 24 40 - -
Pral4868g00014 227 SUPERFAMILY DNA-binding domain 48 108 IPR016177 GO:0003677
Pral4868g00014 227 CDD AP2 49 108 IPR001471 GO:0003700|GO:0006355
Pral4868g00014 227 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4868g00014 Pral-Chr4868 82791 83725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4868g00014 25 225 AP2-EREBP Transcription Factor Family AT1G63030 52.239 2.28e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4868g00014 AP2 4.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4868g00014 - - qsa:O6P43_024235 207.223