Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4868g00013 ATGGCGTCATCGTCGTCTTCCAAGAGCAAGAGGCACCCGCTGTACCACGGGATTCGGTGTCGGGGAGGAAAATGGGTGTCTGAAATCCGGGAGCCACGTAAGGATTCTCGCATATGGCTCGGAACGTTCCCGACGCCAGAGATGGCCGCCGCCGCCTACGACGTAGCGGCGTTAGCCCTTAAAGGCAGCGACGCTGTCCTCAACTTCCCTGACTGGGTCGGGACTTATCCTGTGCCGGCTTCTCCATCTGCTGCTGACATTCGCAGCGCCGCCGCAGCCGCAGCCGCACTCATGGCACCTCAAGAACAGACTCAAACCAACGACGCTGCCAATGTCGCAGGTAATGCTAATCATGGGAATGAGGGCAATGTTTCGTGGTCTGAGACAGAGTTTGTGGACGAGGAAGCCATATTCGACATGCCAAACTTGCTCGTGGACATGGCCGGAGGAATGCTGCTCTCCCCTCCCAGAATCGACCCGCCACCCTCCGATAACTCCCCCGACGACCGGTCGTACGGAGAAACATTGTGGAACTATTTTTGA 543 0.5764 MASSSSSKSKRHPLYHGIRCRGGKWVSEIREPRKDSRIWLGTFPTPEMAAAAYDVAALALKGSDAVLNFPDWVGTYPVPASPSAADIRSAAAAAAALMAPQEQTQTNDAANVAGNANHGNEGNVSWSETEFVDEEAIFDMPNLLVDMAGGMLLSPPRIDPPPSDNSPDDRSYGETLWNYF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4868g00013 180 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Pral4868g00013 180 MobiDBLite consensus disorder prediction 154 173 - -
Pral4868g00013 180 Pfam AP2 domain 15 62 IPR001471 GO:0003700|GO:0006355
Pral4868g00013 180 ProSiteProfiles AP2/ERF domain profile. 14 70 IPR001471 GO:0003700|GO:0006355
Pral4868g00013 180 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Pral4868g00013 180 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Pral4868g00013 180 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Pral4868g00013 180 Gene3D AP2/ERF domain 14 71 IPR036955 GO:0003700|GO:0006355
Pral4868g00013 180 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 179 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4868g00013 Pral-Chr4868 73163 74115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4868g00013 4 179 AP2-EREBP Transcription Factor Family AT5G52020 53.073 1.45e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4868g00013 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4868g00013 - - gmx:100778793 196.052