Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4868g00001 ATGGGTAAGGTATCAAAATGGTTTCGTGGTTTTCTCAGTCTTAAAAAGCCTGATTCCTCATCTCCCACTCCCACCACCTCAGCTCCAAAACCCCCCAAAGAGAAACGCAGATGGAGCTTCGTCAAATCTTACAGAGAACACGATAACCTCCCTACCACCACCGCTGTTAAAACCGGCATTCATAATAATGATAATCATTCGATCACCGTGGCTGCAGCTCCTGCACTCAGACTTCGTAGCGGCGGCAGATGCGTCCAAGCCACGGCGCAAAGCACCGCTAACCGTGAAGAATGGGCAGCCGTTAAGATTCAAGCCGCTTTTCGTGGATGTTTGGCAAGGAGAGCCCTGCGAGCGTTAAAAGGATTGGTCAAGCTGCAGGCGCTGGTGAGGGGTCAGGTGGCGAGGAAGCGGACGGCTGAGCGGCTGCAAAAAATGCAATTACACTTGCGAGCTCAGACTCGAGTTCGGGCGGGGCGGCTTAGTTCATCTTTGATGGCCATGTCATCAAATGTCCACCTCCATGATCCGGCAACACCTGACAAAGTTGAAAACCCCATCAGATCCAAGAGCATGAAATATGATCAGTCGTCAATACTCAAGATCAGTGGCAATAAGGAGAAATGTTGGAAGACAACAGACAGTTGGGTAGATGAGAAATCATGGAATCGACAAAGATCGTCCGTAAGAATCTGTGTGAACGATGAAAGAAATGTAAGGATCCTGGAAATGGATTCTGAAAAAAGAAACTTGGCATCAAAACGCAGAGCCAGAAACCTCTTCCACTCCGCTAATCTAGCTTTAGTTTCTGATCCTTATAGTCAGAATTTGATCGCCACAAAGAACTCAACAATTCATCATTCCGGTCCAATCCATCGTGAAATTCACCAATCTTACAGTCCACCAGAAGGGCATGAAGTTGATGAGACCCCATTCTGCACAGCAAACAATAGTCCTCCTTTTTTTTCTGGGTCCTCTAGGGATGGTAGCTCTAAAAGAAGCCCTTTTACTCCTACTAAGAGTGATGGTTCAAGGAGTTATGTAAGTGCTTATTCTGACTGCCCTAATTATATGGCTTACACCGAATCTTCTAAGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGACAAGGTATGAGAGGTCTGGTTCGTCTAATAGGTACTCAATGAACGGATTTGGCGAGTCAAGATTGTCTGCACAAAGGGCATCTGCTTTGCATGCAAGCTTCACTAGCAAAGCCTATCCCGGTTCTGGTCGTTTGGACAAGTTTGGTTTGCCTATGGGTCATAGATACTGA 1299 0.4673 MGKVSKWFRGFLSLKKPDSSSPTPTTSAPKPPKEKRRWSFVKSYREHDNLPTTTAVKTGIHNNDNHSITVAAAPALRLRSGGRCVQATAQSTANREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGQVARKRTAERLQKMQLHLRAQTRVRAGRLSSSLMAMSSNVHLHDPATPDKVENPIRSKSMKYDQSSILKISGNKEKCWKTTDSWVDEKSWNRQRSSVRICVNDERNVRILEMDSEKRNLASKRRARNLFHSANLALVSDPYSQNLIATKNSTIHHSGPIHREIHQSYSPPEGHEVDETPFCTANNSPPFFSGSSRDGSSKRSPFTPTKSDGSRSYVSAYSDCPNYMAYTESSKAKVRSLSAPKQRTRYERSGSSNRYSMNGFGESRLSAQRASALHASFTSKAYPGSGRLDKFGLPMGHRY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4868g00001 432 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
Pral4868g00001 432 MobiDBLite consensus disorder prediction 368 390 - -
Pral4868g00001 432 SMART iq_5 95 117 IPR000048 GO:0005515
Pral4868g00001 432 SMART iq_5 118 139 IPR000048 GO:0005515
Pral4868g00001 432 Pfam Protein of unknown function (DUF4005) 327 391 IPR025064 -
Pral4868g00001 432 ProSiteProfiles IQ motif profile. 120 146 IPR000048 GO:0005515
Pral4868g00001 432 MobiDBLite consensus disorder prediction 310 345 - -
Pral4868g00001 432 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Pral4868g00001 432 Pfam IQ calmodulin-binding motif 123 137 IPR000048 GO:0005515
Pral4868g00001 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 139 IPR027417 -
Pral4868g00001 432 MobiDBLite consensus disorder prediction 293 345 - -
Pral4868g00001 432 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Pral4868g00001 432 Gene3D - 93 148 - -
Pral4868g00001 432 MobiDBLite consensus disorder prediction 13 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4868g00001 Pral-Chr4868 211 3579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4868g00001 1 58 IQD Protein Family AT4G23060 42.623 7.43e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4868g00001 - - qsa:O6P43_024223 393.275