Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00058 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGCCCCCCTTCATATTACATGCATAGAGGAGGCATTGCCGGGCCTGTCTCTGGAATACATTCCGGAGGGTTTCAAGTGCCTCCTGGGTTCAGACCAAACACTGGCATTCCAGCACAGTCTAATGTACGAGCTAGCTCTATGGGTTCTACTGTTACAGTAGAACCTGCTCGTCCTAATTATAGTCATAGTCATGGCATTAGCGTTAGTTCGTCTCCTGGAGCACCTCCTTCGAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCTCGTAAATACCGTCCCGATGGAACCGTTTCACTGGGTCTGTCTCCCATGTCTGCCCCTGCAAATTCTACCCTCGCGTCGAGCACTCCATCCCAGAAACGAGCTAGAGGTCGCCCGCCCGGAAGTGGAAGGAAACAACAACTAGCCTCGCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCTTTTGCTCCTCATGTTATCACGATTGGAGCTGGAGAGGACATTGTAGCGAAGTTATTGTCCATCTCACGGCAGAGACCTAGGGCGCTCTGCATCTTGTCTGGTACTGGGACAGTTTCATCAGTTACTCTGCGGCAGCCTGCTTCTACTGCTGTCAGTATCACTCTTGAGGGCCGATTCCAAATATTACGCTTGTCTGGTTCTTACCTGGTTGCCGAAGACGGTGGACACCGCAATAGAACTGGTGGTGTGAGTGTTTCCCTTGCCAGTCCTGAAGGTCATGTTATTGGTGGTGGGGTTGCTGTGCTTATTGCTGCAAGCCAAGTGCAGGTGGTAGTGTGCAGTTTTATTTATGAAGGGTCCAAGACCAAGCAAGGGAGTGCCTCTCAGGGCGATGCTTCTGAAGCTGAGCATGACAAGTTAGCTACCCCGGCAAGTGCTCCGCCATCTCAAAACTACAGTCAACCATCAAGAGGCATTTGGCCATCTGATCTAAAAAGTACACATACTGGTATTGACTTGATGCATGGATAA 1011 0.5064 MDGREAMAFSGGPPSYYMHRGGIAGPVSGIHSGGFQVPPGFRPNTGIPAQSNVRASSMGSTVTVEPARPNYSHSHGISVSSSPGAPPSSERVKKKRGRPRKYRPDGTVSLGLSPMSAPANSTLASSTPSQKRARGRPPGSGRKQQLASLGEWMNSSAGMAFAPHVITIGAGEDIVAKLLSISRQRPRALCILSGTGTVSSVTLRQPASTAVSITLEGRFQILRLSGSYLVAEDGGHRNRTGGVSVSLASPEGHVIGGGVAVLIAASQVQVVVCSFIYEGSKTKQGSASQGDASEAEHDKLATPASAPPSQNYSQPSRGIWPSDLKSTHTGIDLMHG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00058 336 MobiDBLite consensus disorder prediction 45 87 - -
Pral4864g00058 336 ProSiteProfiles PPC domain profile profile. 156 298 IPR005175 -
Pral4864g00058 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
Pral4864g00058 336 Gene3D - 163 288 - -
Pral4864g00058 336 MobiDBLite consensus disorder prediction 304 323 - -
Pral4864g00058 336 CDD DUF296 163 275 IPR005175 -
Pral4864g00058 336 MobiDBLite consensus disorder prediction 113 133 - -
Pral4864g00058 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 308 IPR039605 GO:0003680
Pral4864g00058 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 277 - -
Pral4864g00058 336 MobiDBLite consensus disorder prediction 282 336 - -
Pral4864g00058 336 MobiDBLite consensus disorder prediction 30 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00058 Pral-Chr4864 273597 277444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00058 1 321 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.693 2.26e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00058 - - qsa:O6P43_034235 440.654