Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00056 ATGGGAATGTTTGGCATGGGTTGTGAGTTTTCCAAGTTCTCGGCATGCTGCTGGGGAGCAGAGCAAAATGGTCCCAAAATCCTCATTGATGGAAACAAAGAGGAGCATGAAGCTAATAATCTGCCGCCGTTTCATCAATACACAATTGATCAACTTAGGATGGCCACGTCTGGATTTGCAGTGGAAAATATAGTTTCCGAGCATGGAGATAAGGCTCCGAACGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCAAATTGCTGTAAAGCGATTTAATAGATTAGCCTGGCCTGATGCCCAGCAATTTTTGGATGAAGCCAGAGCTGTTGGTCAGCTTAGGAACCAGAAATTGGCAAATTTGCTTGGCTGTTGCTGTGAAGGTCATGAAAGGTTACTTGTTGCAGAATACATGCCTAACGATACTTTGGCAAAACATTTGTTCCACTGGGAAACTCAACCTATGAAATGGCCAATGCGACTTAGAGCTGCTTTGTACCTTGCCCAAGCTTTAGAATACTGTACCAACAGAGGACGCGATCTATATCATGATCTCAATGCTTATAGAGTTCTCTTTGATGTTGAGGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTACAGTACAAATCTAGCATTTGCCCCTCCTGAGTATCTCAGAACAGGAAGAGTAACTCCAGAAACTGTAACATATAGTTTTGGCACCCTTTTGCTTGACCTTCTCAGTGGAAAACATATACCTCCGAGCCATGCACTTGACCTGGTTCGGGGAAGAAACCTTCAGATTCTTACAGACTCTTGTTTAGAAGGACAATTTTCAGTTTATGAGGGAACTGAGTTATTGCGCCTAGCATCACAATGTTTACAACCTGAACCGCATGAGCGTCCTTATCTCAAGTCATTGGCCCCTGCTTTGATACCCTTACAAAAGGAATCCAAGGTTCCTTCTCATGTGCTTATGGATATTCCCCATGGTGGTGCTGCTTTACCTCTGCCACCACTCAGTGAGGCTTGTCTTAAAATGGACTTGACTGCTATACACGAGATCATAGAAAAGATCGGGTATAAAGATGATGAAGGTGTTGCATATGAGCTTTCATTCCAAATTTGGACCAACCAAATGCAAGAAACATTGAACTTGAAGAATAAGGGTGATGCTGCATTTCGACGCAAGGATTTCAAAGCTGCAATTGATAGCTACACACAGTTCTCTGAAGTCGGAACCATGGTTTCTCCGACAGTTTATGCACGCCGAAGTCTATCTTATCTCATGAGTGATATGCCTGAGGAAGCACTTGACGATGCATTGCAGGCACAAGCAATATCCCCTCTCTGGTACATTGCATTCCATTTGCAAGCTGCTGCTCTATTTGCACTGGGCAGGGAGGATGAGGCCCATGTGGCACTCAAAGAGGGTTCTGCACTTCATAATAAAAAGAATACAAATTAG 1473 0.4325 MGMFGMGCEFSKFSACCWGAEQNGPKILIDGNKEEHEANNLPPFHQYTIDQLRMATSGFAVENIVSEHGDKAPNVVYKGKLENQMQIAVKRFNRLAWPDAQQFLDEARAVGQLRNQKLANLLGCCCEGHERLLVAEYMPNDTLAKHLFHWETQPMKWPMRLRAALYLAQALEYCTNRGRDLYHDLNAYRVLFDVEGNPRLSCFGLMKNSRDGKSYSTNLAFAPPEYLRTGRVTPETVTYSFGTLLLDLLSGKHIPPSHALDLVRGRNLQILTDSCLEGQFSVYEGTELLRLASQCLQPEPHERPYLKSLAPALIPLQKESKVPSHVLMDIPHGGAALPLPPLSEACLKMDLTAIHEIIEKIGYKDDEGVAYELSFQIWTNQMQETLNLKNKGDAAFRRKDFKAAIDSYTQFSEVGTMVSPTVYARRSLSYLMSDMPEEALDDALQAQAISPLWYIAFHLQAAALFALGREDEAHVALKEGSALHNKKNTN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00056 490 Gene3D Transferase(Phosphotransferase) domain 1 139 330 - -
Pral4864g00056 490 FunFam probable serine/threonine-protein kinase At5g41260 139 330 - -
Pral4864g00056 490 Gene3D Phosphorylase Kinase; domain 1 32 137 - -
Pral4864g00056 490 FunFam probable serine/threonine-protein kinase At4g35230 383 490 - -
Pral4864g00056 490 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Pral4864g00056 490 Gene3D Tetratricopeptide repeat domain 378 490 IPR011990 GO:0005515
Pral4864g00056 490 SUPERFAMILY Protein kinase-like (PK-like) 36 317 IPR011009 -
Pral4864g00056 490 ProSiteProfiles Protein kinase domain profile. 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4864g00056 490 FunFam probable serine/threonine-protein kinase At4g35230 34 137 - -
Pral4864g00056 490 SUPERFAMILY TPR-like 385 484 IPR011990 GO:0005515
Pral4864g00056 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 488 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00056 Pral-Chr4864 257197 263716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00056 25 313 Glycoside Hydrolase AT3G07070 32.500 1.13e-37 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral4864g00056 PK_Tyr_Ser-Thr 2.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00056 K14500 - qsa:O6P43_034239 785.408