Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00053 ATGGGTTGTGAGTTTTCCAAGTTCTCGGCATGCTGCTGGGGAGCAGAGCAAAATGGTCCCAAAATCCTCATTGATGGAAACAAAGAGGAGCATGAAGCTAATAATCTGCCGCCGTTTCATCAATACACAATTGATCAACTTAGGATGGCCACGTCTGGATTTGCAGTGGAAAATATAGTTTCCGAGCATGGAGATAAGGCTCCGAACGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCAAATTGCTGTAAAGCGATTTAATAGATTAGCCTGGCCTGATGCCCAGCAATTTTTGGATGAAGCCAGAGCTGTTGGTCAGCTTAGGAACCAGAAATTGGCAAATTTGCTTGGCTGTTGCTGTGAAGGTCATGAAAGGTTACTTGTTGCAGAATACATGCCTAACGATACTTTGGCAAAACATTTGTTCCACTGGGAAACTCAACCTATGAAATGGCCAATGCGACTTAGAGCTGCTTTGTACCTTGCCCAAGCTTTAGAATACTGTACCAACAGAGGACGCGATCTATATCATGATCTCAATGCTTATAGAGTTCTCTTTGATGTTGAGGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGGAAAAGTTACAGTACAAATCTAGCATTTGCCCCTCCTGAGTATCTCAGAACAGGAAGAGTAACTCCAGAAACTGTAACATATAGTTTTGGCACCCTTTTGCTTGACCTTCTCAGTGGAAAACATATACCTCCGAGCCATGCACTTGACCTGGTTCGGGGAAGAAACCTTCAGATTCTTACAGACTCTTGTTTAGAAGGACAATTTTCAGTTTATGAGGGAACTGAGTTATTGCGCCTAGCATCACAATGTTTACAACCTGAACCGCATGAGCGTCCTTATCTCAAGTCATTGGCCCCTGCTTTGATACCCTTACAAAAGGAATCCAAGGTTCCTTCTCATGTGCTTATGGATATTCCCCATGGTGGTGCTGCTTTACCTCTGCCACCACTCAGTGAGGCTTGTCTTAAAATGGACTTGACTGCTATACACGAGATCATAGAAAAGATCGGGTATAAAGATGATGAAGGTGTTGCATATGAGCTTTCATTCCAAATTTGGACCAACCAAATGCAAGAAACATTGAACTTGAAGAATAAGGGTGATGCTGCATTTCGACGCAAGGATTTCAAAGCTGCAATTGATAGCTACACACAGTTCTCTGAAGTCGGAACCATGGTTTCTCCGACAGTTTATGCACGCCGAAGTCTATCTTATCTCATGAGTGATATGCCTGAGGAAGCACTTGACGATGCATTGCAGGCACAAGCAATATCCCCTCTCTGGTACATTGCATTCCATTTGCAAGCTGCTGCTCTATTTGCACTGGGCAGGGAGGATGAGGCCCATGTGGCACTCAAAGAGGGTTCTGCACTTCATAATAAAAAGAATACAAATTAG 1458 0.4321 MGCEFSKFSACCWGAEQNGPKILIDGNKEEHEANNLPPFHQYTIDQLRMATSGFAVENIVSEHGDKAPNVVYKGKLENQMQIAVKRFNRLAWPDAQQFLDEARAVGQLRNQKLANLLGCCCEGHERLLVAEYMPNDTLAKHLFHWETQPMKWPMRLRAALYLAQALEYCTNRGRDLYHDLNAYRVLFDVEGNPRLSCFGLMKNSRDGKSYSTNLAFAPPEYLRTGRVTPETVTYSFGTLLLDLLSGKHIPPSHALDLVRGRNLQILTDSCLEGQFSVYEGTELLRLASQCLQPEPHERPYLKSLAPALIPLQKESKVPSHVLMDIPHGGAALPLPPLSEACLKMDLTAIHEIIEKIGYKDDEGVAYELSFQIWTNQMQETLNLKNKGDAAFRRKDFKAAIDSYTQFSEVGTMVSPTVYARRSLSYLMSDMPEEALDDALQAQAISPLWYIAFHLQAAALFALGREDEAHVALKEGSALHNKKNTN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00053 485 SUPERFAMILY TPR-like 380 479 IPR011990 GO:0005515
Pral4864g00053 485 SUPERFAMILY Protein kinase-like (PK-like) 31 312 IPR011009 -
Pral4864g00053 485 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 27 483 IPR045845 GO:0004672|GO:0009742
Pral4864g00053 485 FunFam probable serine/threonine-protein kinase At4g35230 378 485 - -
Pral4864g00053 485 Pfam Protein tyrosine and serine/threonine kinase 71 306 IPR001245 GO:0004672|GO:0006468
Pral4864g00053 485 Gene3D Phosphorylase Kinase; domain 1 27 132 - -
Pral4864g00053 485 FunFam probable serine/threonine-protein kinase At5g41260 134 325 - -
Pral4864g00053 485 FunFam probable serine/threonine-protein kinase At4g35230 29 132 - -
Pral4864g00053 485 ProSiteProfiles Protein kinase domain profile. 57 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4864g00053 485 Gene3D Transferase(Phosphotransferase) domain 1 134 325 - -
Pral4864g00053 485 Gene3D Tetratricopeptide repeat domain 373 485 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00053 Pral-Chr4864 257197 264262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00053 20 308 Glycoside Hydrolase AT3G07070 32.500 8.93e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral4864g00053 PK_Tyr_Ser-Thr 2.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00053 K14500 - qsa:O6P43_034239 785.408