Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00040 ATGGTGAAAGGATCAAAGATAAAGAACCAGACAAGCTTCTTCTTCTTCTTCTTCTTCTTTTTTGCTGGTTTTAATTTTCCTCATCCGGAAATGGTACCAGCGAACCTGAAGAAACAGCTCGCCTTGGCTGTGAGAAGCATCCAGTGGAGCTACGCAGTCTACTGGTCTGGTTCACCTAACAACCCCGGGGCGTTCGAGTGGGGTGAAGGGTACTACAATGGAGACATAAAGACGAGGAAAACAAGCCAAGCAGTAGAACTGAATTCTGACCAAATAGGTTTACGGAGAAGTGAGCAGCTCAGAGATCTATATGAGTCCCTCGCAACTGCAGAATCCAGTCCACAAGCGAAAAGGCCTTCAGCTGCATTATCACCTGAGGACCTCACTGATACAGAGTGGTATTATTTGGTGTGCATGTCATTTGTATTCAACATTGGTCAAGGGTTGCCCGGAAGAACTCTGGCAAAAGGCCAACCCATTTGGTTGTACAATGCCCATTTGGCTGATAGTAGAATTTTTGGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGCGTTCTTGAGCTAGGCACAACTGATCTGGTCTCAGAGGACCTCAGTCTCATTCAACGCATGAGAACTTCCTACTTGGATATTTTAGATGCTAAGGCTCGCAAGGACTCTGTAGTTGCATACAATACGGGAGATGGTGAAGAAATTGCTGGTGCCGTATTGGATCATAATGCTTTTGATGTAAAATTAACTCCTGAGTCTGAGTATGAAGTAGCCAATGCAACTTCTCCGAATAATAGTTCAAATGAGTTTCAAGCCAATCAACAAGCAGATGAGAGATTCATGGTTGAAAGAATAAATGGTGTTGCTTCCCATGTCCAAAGCTGGCAAGTAATGGAGGATGAGTTGAGTAATGGTGCCCATACTTCCATGAATACTAGCGACTGTATTTCTCAAACGTTTGCTGGTTCTGAAAAGAATGCTTCTGTTCCCAAGGGTGGTCATAGTGAGCAAGATCTTCAAGAAGGCAAAAACACAAAAACGACCGTGGTAGATGTTCATAGTGATGAGTGGCATTATCAGAAAATTCTTTCTTCTCTTTTTAAAAGCTCAGACCAATTAATTATGGGAGCACACTTTCAAAACTCTCATCGTGAATCTAGGTTTATCAGTTGGAAGAAAGAAGGATCAATGGGTTGTCAATGGCCAGGAGGCGCAACCCACCAGAAAATATTGAAGAAGATATTGTTTGAAGTTCCTCGTATGCACACAGAATGGTTGCTTGAATCTCAAGAAGAAAATGATTATAAAGAGGGAATGAGACCTGAAGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCAATACTAGATGAGGCAATAGAATACCTTAAAAAGCTGGAGAAAAAGGTGAGAGAGTTGGAAGCTCGCAGAGAGTCCAAAGATTCAGAGACTAGGACTAAAAGAACGCCTCAAGATGTGGTGGAAAGGACCTGTGACAATTATTGCAACAACAGATCTGATAATGGCAAGAAGCCAGCGATGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGCATGAACGACAATGATGTTTTGGTTGAATTGAAGTGTCCTCGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGATTCTCCATTTAACCATAAAATCCAAGATTACAGGAGCAGCTTTTACCTCAGCAAAAAAGATCAAACAAGCACTCCTCAAGAAAATCTTCTAA 1956 0.4126 MVKGSKIKNQTSFFFFFFFFFAGFNFPHPEMVPANLKKQLALAVRSIQWSYAVYWSGSPNNPGAFEWGEGYYNGDIKTRKTSQAVELNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLAKGQPIWLYNAHLADSRIFGRSLLAKSASIQTVVCFPFLDGVLELGTTDLVSEDLSLIQRMRTSYLDILDAKARKDSVVAYNTGDGEEIAGAVLDHNAFDVKLTPESEYEVANATSPNNSSNEFQANQQADERFMVERINGVASHVQSWQVMEDELSNGAHTSMNTSDCISQTFAGSEKNASVPKGGHSEQDLQEGKNTKTTVVDVHSDEWHYQKILSSLFKSSDQLIMGAHFQNSHRESRFISWKKEGSMGCQWPGGATHQKILKKILFEVPRMHTEWLLESQEENDYKEGMRPEADEIGLNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLEKKVRELEARRESKDSETRTKRTPQDVVERTCDNYCNNRSDNGKKPAMNKRKACDIDETEIDSVRLKDISNNVTICMNDNDVLVELKCPRREGVLLEIMEAVSNLHLDFHSVHSSEADGILHLTIKSKITGAAFTSAKKIKQALLKKIF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00040 651 Gene3D - 456 527 IPR036638 GO:0046983
Pral4864g00040 651 PANTHER TRANSCRIPTION FACTOR TT8 28 650 - -
Pral4864g00040 651 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 516 IPR036638 GO:0046983
Pral4864g00040 651 MobiDBLite consensus disorder prediction 330 353 - -
Pral4864g00040 651 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 36 218 IPR025610 -
Pral4864g00040 651 Coils Coil 492 519 - -
Pral4864g00040 651 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 453 502 IPR011598 GO:0046983
Pral4864g00040 651 SMART finulus 459 508 IPR011598 GO:0046983
Pral4864g00040 651 Pfam Helix-loop-helix DNA-binding domain 457 503 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00040 Pral-Chr4864 169952 173913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00040 32 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 48.086 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4864g00040 bHLH-MYC_N 6.3e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00040 - - gmx:100808167 765.377