Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00039 ATGGTGAAAGGATCAAAGATAAAGAACCAGACAAGCTTCTTCTTCTTCTTCTTCTTCTTTTTTGCTGGTTTTAATTTTCCTCATCCGGAAATGGTACCAGCGAACCTGAAGAAACAGCTCGCCTTGGCTGTGAGAAGCATCCAGTGGAGCTACGCAGTCTACTGGTCTGGTTCACCTAACAACCCCGGGGCGTTCGAGTGGGGTGAAGGGTACTACAATGGAGACATAAAGACGAGGAAAACAAGCCAAGCAGTAGAACTGAATTCTGACCAAATAGGTTTACGGAGAAGTGAGCAGCTCAGAGATCTATATGAGTCCCTCGCAACTGCAGAATCCAGTCCACAAGCGAAAAGGCCTTCAGCTGCATTATCACCTGAGGACCTCACTGATACAGAGTGGTATTATTTGGTGTGCATGTCATTTGTATTCAACATTGGTCAAGGGTTGCCCGGAAGAACTCTGGCAAAAGGCCAACCCATTTGGTTGTACAATGCCCATTTGGCTGATAGTAGAATTTTTGGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGCGTTCTTGAGCTAGGCACAACTGATCTGGTCTCAGAGGACCTCAGTCTCATTCAACGCATGAGAACTTCCTACTTGGATATTTTAGATGCTAAGGCTCGCAAGGACTCTGTAGTTGCATACAATACGGGAGATGGTGAAGAAATTGCTGGTGCCGTATTGGATCATAATGCTTTTGATGTAAAATTAACTCCTGAGTCTGAGTATGAAGTAGCCAATGCAACTTCTCCGAATAATAGTTCAAATGAGTTTCAAGCCAATCAACAAGCAGATGAGAGATTCATGGTTGAAAGAATAAATGGTGTTGCTTCCCATGTCCAAAGCTGGCAAGTAATGGAGGATGAGTTGAGTAATGGTGCCCATACTTCCATGAATACTAGCGACTGTATTTCTCAAACGTTTGCTGGTTCTGAAAAGAATGCTTCTGTTCCCAAGGGTGGTCATAGTGAGCAAGATCTTCAAGAAGGCAAAAACACAAAAACGACCGTGGTAGATGTTCATAGTGATGAGTGGCATTATCAGAAAATTCTTTCTTCTCTTTTTAAAAGCTCAGACCAATTAATTATGGGAGCACACTTTCAAAACTCTCATCGTGAATCTAGGTTTATCAGTTGGAAGAAAGAAGGATCAATGGGTTGTCAATGGCCAGGAGGCGCAACCCACCAGAAAATATTGAAGAAGATATTGTTTGAAGTTCCTCGTATGCACACAGAATGGTTGCTTGAATCTCAAGAAGAAAATGATTATAAAGAGGGAATGAGACCTGAAGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCAATACTAGATGAGGCAATAGAATACCTTAAAAAGCTGGAGAAAAAGGTGAGAGAGTTGGAAGCTCGCAGAGAGTCCAAAGATTCAGAGACTAGGACTAAAAGAACGCCTCAAGATGTGGTGGAAAGGACCTGTGACAATTATTGCAACAACAGATCTGATAATGGCAAGAAGCCAGCGATGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGCATGAACGACAATGATGTTTTGGTTGAATTGAAGTGTCCTCGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGATTCTCCATTTAACCATAAAATCCAAGATTACAGGAGCAGCTTTTACCTCAGCAAAAAAGATCAAACAAGCACTCCTCAAGGTAGCTTGGAAGTGTTGA 1962 0.4144 MVKGSKIKNQTSFFFFFFFFFAGFNFPHPEMVPANLKKQLALAVRSIQWSYAVYWSGSPNNPGAFEWGEGYYNGDIKTRKTSQAVELNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLAKGQPIWLYNAHLADSRIFGRSLLAKSASIQTVVCFPFLDGVLELGTTDLVSEDLSLIQRMRTSYLDILDAKARKDSVVAYNTGDGEEIAGAVLDHNAFDVKLTPESEYEVANATSPNNSSNEFQANQQADERFMVERINGVASHVQSWQVMEDELSNGAHTSMNTSDCISQTFAGSEKNASVPKGGHSEQDLQEGKNTKTTVVDVHSDEWHYQKILSSLFKSSDQLIMGAHFQNSHRESRFISWKKEGSMGCQWPGGATHQKILKKILFEVPRMHTEWLLESQEENDYKEGMRPEADEIGLNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLEKKVRELEARRESKDSETRTKRTPQDVVERTCDNYCNNRSDNGKKPAMNKRKACDIDETEIDSVRLKDISNNVTICMNDNDVLVELKCPRREGVLLEIMEAVSNLHLDFHSVHSSEADGILHLTIKSKITGAAFTSAKKIKQALLKVAWKC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00039 653 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 36 218 IPR025610 -
Pral4864g00039 653 MobiDBLite consensus disorder prediction 330 353 - -
Pral4864g00039 653 Coils Coil 492 519 - -
Pral4864g00039 653 Gene3D - 456 527 IPR036638 GO:0046983
Pral4864g00039 653 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 453 502 IPR011598 GO:0046983
Pral4864g00039 653 SMART finulus 459 508 IPR011598 GO:0046983
Pral4864g00039 653 Pfam Helix-loop-helix DNA-binding domain 457 503 IPR011598 GO:0046983
Pral4864g00039 653 PANTHER TRANSCRIPTION FACTOR TT8 28 650 - -
Pral4864g00039 653 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 516 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00039 Pral-Chr4864 169952 173993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00039 32 653 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.806 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4864g00039 bHLH-MYC_N 6.3e-48 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00039 - - gmx:100808167 783.867