Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00021 ATGATCTGGGACGAGAAGCTTTCTCGATCCCGGCCGTGGGTTGACAAACAAAGAAGTAGGAAACCAAAGCATATGGCACGATGGTCAGGTTTCACAAACGGATCTTCCGAAGATTGTCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTGAACGTTGCTGAGGTTGTTACAGATCACCTTGATGTTGAAGTTAAACTAGAGTGCTTGTTTCATCAACTTCTATCAATTTGTATAAAGGAGAAGAATTCTGGAGGCACTATTCGTCCTGTACCTGTAATGCTTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTGTCTGTGAAGGAAAGAGGTGGGTATGCTTCGGTGTCGGAGAAAGGATTGTGGGGTTTTGTGACTAAGGAATTGGGTTTGAATCCTAAACTTTTGGCTTCGGTGAAATTAGTATATAACAAGTATTTGAATGAGTTTGAAAGATGGCTCAGCAAAACTCGTGGAGGAAATAATTTCAAAAGTGGAAATTGTGGGTGTAATATGGATTTTAAGTTTGAGCCGCCAGAGCTAGTAAATGAGTTTAGAGATTTATTATGTGGCAACGCCAAGTTGAAGGATGATGTATCCTTTCATCTGCAATCAAGTAAAATGAGAAGCAACATTGACTTGATTAATCACCAGAGTGAAACGAATTTGTTGGACAACAAAAATCAACCTCCTATATGCGAGAATCTCCACAGTACGCCTGGTGATGCCGACTTGAAATTTTGTAGAAGTGTTGAGAACGATCCTGTTACCTTGAACTCAGAAGCTCCTGTTAAGGAATTTAATTCTCGCAAGCGCAAACGAGACGCATTATTTTCAATGCTGAGCTGGATCAGAAAAACTGCAAAGCATCCTCTTGATCCTTCAATTGAACTGCTACCAGAGGCATCTAAGTGGAAGGATTATAAAGGACAAGATTTTTGGGTTCAGATGCTTAGAGCAAGAGAGGCACTACAACTGAGGTCTTGTGACAAACTAAGCTGCAGGCAGTCTTCCTTGCAGAAGCAAAAGATGCATCCTGCCATGTATGAGGATCATGCTGCTGTCAGTCACCATTCTACAGCTAAACTGAGATGGAGCAAAAGGCTGCCTACCTCAGTTAAATCTCAAATATGCTCTTGTTGCAATTCACATTCAGCTACTGAAAACAAGTTACCATGTTCAGTCACCACTGACGCAGACAATGCTTCACAAGAGAAAACAACGGCAGCAGATGGTTTGTTGAATGCAAAGGAAATAGCTAACCCGGCCGCAGATGATGCTGCTGAAAAACAAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGAATGGTGTAGTTTCTGAAAGCGATTCTAAATGGCTGGGCACGCAAGTATGGCCATTGAAGGATAGGGAAACACACCCCGTTACTGAGACCTGTATTATTGGGAGAGGAAGACCAGAGACTTGTGGCTGTCTAGTTCAAGGTTCTGTTGAATGTGTTAGATTTCATATTGCTGAGGAGAGGATGAAGCTGAAGCTTGACTTGGGTTCAGCATTTTACCACTGGGGATTTGATAGCATGGGGGAGGAAGTTTCACTTCAATGGACTGCTGAAGAAGAAAAGAAATTCAAAGATATCATGATGTCAAGTCTGCCCTCCCAGGATAGAAGCAAGCCGTTCAAGTATTTTCCAAAGAAGGCATGGAGAAGCTTGGTTAGCTATTACTTCAATGTATTTCTTATTCAACGCAGGACTTATCAGAATCGTGTGACTCCAACTAGTATTGATAGTGATGATGACGAAAATGAATTTGGATCTTTTACCGATGGCTTTGGGATGGAAGCTGTAAAGGGTCCAGGCTCCAAGCTTCTGGAGTGTTCACAGAACAACCGATGCACTGAACTGGAGTGA 1917 0.422 MIWDEKLSRSRPWVDKQRSRKPKHMARWSGFTNGSSEDCLETVGGHQGNDCCLNVAEVVTDHLDVEVKLECLFHQLLSICIKEKNSGGTIRPVPVMLGDGQSLDLYKLFLSVKERGGYASVSEKGLWGFVTKELGLNPKLLASVKLVYNKYLNEFERWLSKTRGGNNFKSGNCGCNMDFKFEPPELVNEFRDLLCGNAKLKDDVSFHLQSSKMRSNIDLINHQSETNLLDNKNQPPICENLHSTPGDADLKFCRSVENDPVTLNSEAPVKEFNSRKRKRDALFSMLSWIRKTAKHPLDPSIELLPEASKWKDYKGQDFWVQMLRAREALQLRSCDKLSCRQSSLQKQKMHPAMYEDHAAVSHHSTAKLRWSKRLPTSVKSQICSCCNSHSATENKLPCSVTTDADNASQEKTTAADGLLNAKEIANPAADDAAEKQVAIGPLFQAEVPKWNGVVSESDSKWLGTQVWPLKDRETHPVTETCIIGRGRPETCGCLVQGSVECVRFHIAEERMKLKLDLGSAFYHWGFDSMGEEVSLQWTAEEEKKFKDIMMSSLPSQDRSKPFKYFPKKAWRSLVSYYFNVFLIQRRTYQNRVTPTSIDSDDDENEFGSFTDGFGMEAVKGPGSKLLECSQNNRCTELE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00021 638 MobiDBLite consensus disorder prediction 1 21 - -
Pral4864g00021 638 CDD ARID 84 156 - -
Pral4864g00021 638 MobiDBLite consensus disorder prediction 1 15 - -
Pral4864g00021 638 Pfam ARID/BRIGHT DNA binding domain 81 156 IPR001606 GO:0003677
Pral4864g00021 638 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 64 629 - -
Pral4864g00021 638 Gene3D - 62 169 IPR036431 GO:0003677
Pral4864g00021 638 ProSiteProfiles ARID domain profile. 67 160 IPR001606 GO:0003677
Pral4864g00021 638 SMART bright_3 68 161 IPR001606 GO:0003677
Pral4864g00021 638 SUPERFAMILY ARID-like 64 163 IPR036431 GO:0003677
Pral4864g00021 638 SMART ARID_2 64 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00021 Pral-Chr4864 82861 93139 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral4864g00021 ARID 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00021 - - gmx:100819320 687.182