Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00020 ATGGCACGATGGTCAGGTTTCACAAACGGATCTTCCGAAGATTGTCTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTGAACGTTGCTGAGGTTGTTACAGATCACCTTGATGTTGAAGTTAAACTAGAGTGCTTGTTTCATCAACTTCTATCAATTTGTATAAAGGAGAAGAATTCTGGAGGCACTATTCGTCCTGTACCTGTAATGCTTGGTGATGGTCAATCGTTGGATTTATACAAACTGTTCTTGTCTGTGAAGGAAAGAGGTGGGTATGCTTCGGTGTCGGAGAAAGGATTGTGGGGTTTTGTGACTAAGGAATTGGGTTTGAATCCTAAACTTTTGGCTTCGGTGAAATTAGTATATAACAAGTATTTGAATGAGTTTGAAAGATGGCTCAGCAAAACTCGTGGAGGAAATAATTTCAAAAGTGGAAATTGTGGGTGTAATATGGATTTTAAGTTTGAGCCGCCAGAGCTAGTAAATGAGTTTAGAGATTTATTATGTGGCAACGCCAAGTTGAAGGATGATGTATCCTTTCATCTGCAATCAAGTAAAATGAGAAGCAACATTGACTTGATTAATCACCAGAGTGAAACGAATTTGTTGGACAACAAAAATCAACCTCCTATATGCGAGAATCTCCACAGTACGCCTGGTGATGCCGACTTGAAATTTTGTAGAAGTGTTGAGAACGATCCTGTTACCTTGAACTCAGAAGCTCCTGTTAAGGAATTTAATTCTCGCAAGCGCAAACGAGACGCATTATTTTCAATGCTGAGCTGGATCAGAAAAACTGCAAAGCATCCTCTTGATCCTTCAATTGAACTGCTACCAGAGGCATCTAAGTGGAAGGATTATAAAGGACAAGATTTTTGGGTTCAGATGCTTAGAGCAAGAGAGGCACTACAACTGAGGTCTTGTGACAAACTAAGCTGCAGGCAGTCTTCCTTGCAGAAGCAAAAGATGCATCCTGCCATGTATGAGGATCATGCTGCTGTCAGTCACCATTCTACAGCTAAACTGAGATGGAGCAAAAGGCTGCCTACCTCAGTTAAATCTCAAATATGCTCTTGTTGCAATTCACATTCAGCTACTGAAAACAAGTTACCATGTTCAGTCACCACTGACGCAGACAATGCTTCACAAGAGAAAACAACGGCAGCAGATGGTTTGTTGAATGCAAAGGAAATAGCTAACCCGGCCGCAGATGATGCTGCTGAAAAACAAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGAATGGTGTAGTTTCTGAAAGCGATTCTAAATGGCTGGGCACGCAAGTATGGCCATTGAAGGATAGGGAAACACACCCCGTTACTGAGACCTGTATTATTGGGAGAGGAAGACCAGAGACTTGTGGCTGTCTAGTTCAAGGTTCTGTTGAATGTGTTAGATTTCATATTGCTGAGGAGAGGATGAAGCTGAAGCTTGACTTGGGTTCAGCATTTTACCACTGGGGATTTGATAGCATGGGGGAGGAAGTTTCACTTCAATGGACTGCTGAAGAAGAAAAGAAATTCAAAGATATCATGATGTCAAGTCTGCCCTCCCAGGATAGAAGCAAGCCGTTCAAGTATTTTCCAAAGAAGGCATGGAGAAGCTTGGTTAGCTATTACTTCAATGTATTTCTTATTCAACGCAGGACTTATCAGAATCGTGTGACTCCAACTAGTATTGATAGTGATGATGACGAAAATGAATTTGGATCTTTTACCGATGGCTTTGGGATGGAAGCTGTAAAGGGTCCAGGCTCCAAGCTTCTGGAGTGTTCACAGAACAACCGATGCACTGAACTGGAGTGA 1845 0.4195 MARWSGFTNGSSEDCLETVGGHQGNDCCLNVAEVVTDHLDVEVKLECLFHQLLSICIKEKNSGGTIRPVPVMLGDGQSLDLYKLFLSVKERGGYASVSEKGLWGFVTKELGLNPKLLASVKLVYNKYLNEFERWLSKTRGGNNFKSGNCGCNMDFKFEPPELVNEFRDLLCGNAKLKDDVSFHLQSSKMRSNIDLINHQSETNLLDNKNQPPICENLHSTPGDADLKFCRSVENDPVTLNSEAPVKEFNSRKRKRDALFSMLSWIRKTAKHPLDPSIELLPEASKWKDYKGQDFWVQMLRAREALQLRSCDKLSCRQSSLQKQKMHPAMYEDHAAVSHHSTAKLRWSKRLPTSVKSQICSCCNSHSATENKLPCSVTTDADNASQEKTTAADGLLNAKEIANPAADDAAEKQVAIGPLFQAEVPKWNGVVSESDSKWLGTQVWPLKDRETHPVTETCIIGRGRPETCGCLVQGSVECVRFHIAEERMKLKLDLGSAFYHWGFDSMGEEVSLQWTAEEEKKFKDIMMSSLPSQDRSKPFKYFPKKAWRSLVSYYFNVFLIQRRTYQNRVTPTSIDSDDDENEFGSFTDGFGMEAVKGPGSKLLECSQNNRCTELE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00020 614 Pfam ARID/BRIGHT DNA binding domain 57 132 IPR001606 GO:0003677
Pral4864g00020 614 CDD ARID 60 132 - -
Pral4864g00020 614 Gene3D - 38 145 IPR036431 GO:0003677
Pral4864g00020 614 SUPERFAMILY ARID-like 40 139 IPR036431 GO:0003677
Pral4864g00020 614 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
Pral4864g00020 614 SMART bright_3 44 137 IPR001606 GO:0003677
Pral4864g00020 614 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 605 - -
Pral4864g00020 614 SMART ARID_2 40 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00020 Pral-Chr4864 82861 93139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pral4864g00020 ARID 1.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00020 - - gmx:100819320 687.182