Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00016 ATGGGCGGTTGCTGTTGCTGTTGTTCAAGAGAAACCGAACTGAGCGATCCACCAGCGTACTTCTATCAGCCAAGAGCATCAGAGGAGCGTGTTCCTCTATCATCTAATCATGGTTCTGCGTCTGCTTTCTCCCGAGGGCTCCTTGTTGATACTAACCTTGAAACTTCAAGTCCTGACACTTATAGACCACCTCCTGCCCCTGCTCCTTACAGCAACGTTACTTTGGTTGTCACTCAAACTCCACCCGGGGTTCATGAAATTAGTGATAATAAGACTAATACATCCATTCAATCTACAGATTCTAATTCAGCTGAAGAAATAGTTACTAGTGATGGTCATGGAAATATGACCAAGTTGGAAGAGCAGAAAGAACTAGAGGGTAAAGTTCAGAGTGATTTAGAACTGGACCCAGCTAAGGATTCAGAAATTGAACTTCAAAAGCTAGATGAACCTGTCATTTTAGCTGAAGAGGAGGATGTGTGTCCTATCTGTTTAGAAGAGTACGATGATGAGAATCCAAAACTCAACACAAAATGTGATCATCATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAAACTGTCCCGTGTGTGATAAGAATCCTGGTGTTGAATTTGATTACATGTGA 639 0.421 MGGCCCCCSRETELSDPPAYFYQPRASEERVPLSSNHGSASAFSRGLLVDTNLETSSPDTYRPPPAPAPYSNVTLVVTQTPPGVHEISDNKTNTSIQSTDSNSAEEIVTSDGHGNMTKLEEQKELEGKVQSDLELDPAKDSEIELQKLDEPVILAEEEDVCPICLEEYDDENPKLNTKCDHHFHLACILEWMERSENCPVCDKNPGVEFDYM 212
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00016 212 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 38 203 - -
Pral4864g00016 212 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Pral4864g00016 212 MobiDBLite consensus disorder prediction 83 109 - -
Pral4864g00016 212 CDD RING-H2_AIRP1-like 157 203 - -
Pral4864g00016 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 206 IPR013083 -
Pral4864g00016 212 Pfam Ring finger domain 160 201 IPR001841 -
Pral4864g00016 212 SUPERFAMILY RING/U-box 154 204 - -
Pral4864g00016 212 SMART ring_2 161 201 IPR001841 -
Pral4864g00016 212 FunFam Putative E3 ubiquitin-protein ligase RHB1A 138 205 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral4864g00016 Pral-Chr4864 79853 82754 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00016 1 203 C3H Transcription Factor Family AT5G41350 52.174 7.73e-62 190
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00016 - - gmx:100816369 280.796