Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00011 ATGAATTCTGCTTCAATGTCTTCAAATGCCTACGCTTTTGATTCTTCTCTTCTCAGACATTCGAGCTCAGACATGGCCTCCTTTGATGAAGGCGGAGACCTTTTCTTCTCTGACCCTCTTCCTTTCCCTTTCTTCAGCCCCACAGACGTCGTTCATCAGATTCCAGACAACGAAACATACCAACAACACAAACTGGACGAATTTTCTTCTTCTCTTGACCCCTTTTCCTCTTCTTTCTTTTCCTTTTCTCCTCCAAGCACCCACCTGGAAAACCTGAGCCTTTATCAGCAGCATCTTTCATCAACTGCAACAAATTTAGGAGCTGAGTTTGGAAATGTCTCTGTGAAGAGTGAAGATTTACAAATGGGTGCTGATTACAACGGCAACCAGAACTTTGTTCCTCCCAGTTACAATGGTTCTGAAAATGCACACAAGTCCATTCAAAGGAGTTACAGCAGCAACTGTTTTGATGGGAAGCCTGGTTTTCTCTTTCAACCCCACTATGATACTCTCATAGATTCCTCAAACTTTCAAGGCCAGACCGTGAATTCTCCTGAAAACGATCAAGTAAGAAGAGTGTGCAGTACAGGAGACTTGCAGAACATGGGCTCTACTCAAACGAACCACAGGGAAGGCTCGTTCTTAGAGGAAGCAAACTTCAAAGTGGGGCGTTACAGTGCCGAAGAAAGAAAAGAGAAAATCTCGAAGTACAGAGCCAAGCGAGGCCAGAGGAACTTCAACAAGACGATTAAGTATGCTTGCCGGAAGACACTGGCAGACAATCGGCCACGCATACGTGGCAGATTCGCACGAAACGACGAGACCGGCGAGAATTCCAGGGTTTCATGTTCAACCAGAAACGAAGAAGACGACGAGTATTGGTGGGATTGA 891 0.4545 MNSASMSSNAYAFDSSLLRHSSSDMASFDEGGDLFFSDPLPFPFFSPTDVVHQIPDNETYQQHKLDEFSSSLDPFSSSFFSFSPPSTHLENLSLYQQHLSSTATNLGAEFGNVSVKSEDLQMGADYNGNQNFVPPSYNGSENAHKSIQRSYSSNCFDGKPGFLFQPHYDTLIDSSNFQGQTVNSPENDQVRRVCSTGDLQNMGSTQTNHREGSFLEEANFKVGRYSAEERKEKISKYRAKRGQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGENSRVSCSTRNEEDDEYWWD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00011 296 Pfam CCT motif 230 272 IPR010402 GO:0005515
Pral4864g00011 296 MobiDBLite consensus disorder prediction 269 296 - -
Pral4864g00011 296 ProSiteProfiles CCT domain profile. 230 272 IPR010402 GO:0005515
Pral4864g00011 296 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 73 275 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00011 Pral-Chr4864 46871 48337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00011 226 281 C2C2-CO-like Transcription Factor Family AT5G24930 48.214 4.50e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4864g00011 CCT 9.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00011 - - pcin:129284634 444.121