Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4864g00005 ATGGGATTCCCAGTGGGCTACACAGATCTCGTCTTCCCCAAGATATTCCTTCACGTCCTCTCTCTTCTGGGTTTCATCCGAAAACTCATCACCATTCTCTTTCGCTACCTGGGTCTGCACGATTTTCTCGAGCCCGACATTGTTTGGCCCCACCCGGTGCCCGAATTTCACTCGGTGTCGGCCATGCTCATCCGCGAAATCCTGCCGGTCGCCAAGTTCTCCGACCTGGTGGACCCGCCGGATAGCTGCGCCGTCTGTCTCTACGAGTTCGAGGCCGACGACGAGATCAGGCGGCTCACCAACTGTAGGCACATATATCACCGGGGATGCCTGGACCGGTGGATGGGTTACGATCAGAGAACGTGTCCCTTGTGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCCTTCAATGATAGGCTCTGGGCTGCTTCTGGCATTCCAGAATTCTACGCTGATTCTGAAGAATATCCTCATCTTTCTTCTTTTTAG 495 0.5354 MGFPVGYTDLVFPKIFLHVLSLLGFIRKLITILFRYLGLHDFLEPDIVWPHPVPEFHSVSAMLIREILPVAKFSDLVDPPDSCAVCLYEFEADDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYADSEEYPHLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4864g00005 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 19 146 - -
Pral4864g00005 164 Pfam Ring finger domain 81 126 IPR001841 -
Pral4864g00005 164 CDD RING-H2_RHA1-like 81 129 - -
Pral4864g00005 164 SUPERFAMILY RING/U-box 63 132 - -
Pral4864g00005 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Pral4864g00005 164 SMART ring_2 83 125 IPR001841 -
Pral4864g00005 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4864g00005 Pral-Chr4864 28532 29285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4864g00005 1 147 C3H Transcription Factor Family AT1G63840 61.039 4.59e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4864g00005 K16281 - jre:109014495 275.018