Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4863g00008 ATGAGTGAGGAATCATCAGAGCCACCTTCCATGGAGGCCAACTCATCAGAGGGGCTACTGACTCTGAAGCTGATGGTGGGCGAACCCTCTTCATCATCAAAACCATCCGAGGATTGTAACAACGAAAAGATAGCAGAAAGAGCGGAGGCCAGTAATAATAATCAGCAGCGAAAATTCTGTTGCAAGTTTTGCAGCAAGAAGTTCCATAGCTCTCAAGCTCTGGGCGGACACCAAAATGCTCACAGGCGTGAGCGTGTACTCAGCAAAATTGACAAAGAGCTTGATATGGGCACTTTTGGACGCTTTGGTCCTCACTTTTGCCCTTATTATTCAACCATGGCTGGTCTTCCCTTCACAGCGTCGCCTCCTTTTCATCCGGGGCTTCATCACCACATGAGCCCAGTGGCTCGTTATGGCTCGCAAGCGCCAGCCAACTCGGCCCTAGAGGCGTTCCGGTTCGGCTCAAGAAGCTCCTGGGCTGAAGAAGGAGCGGTTCAACGCAGAGCAAATCGCAGAAGCAATAATAATGTTCAGAGCTCTTCTTCACCTGCAAACACAAAGCCAGATGAATCAGGAGGCACTGGTGCAAGTGCAAATGTTGGAGGCTTCGAGAGGAACTCATATGTGGGAAGCATTCATGATACACCATCAGCCTCGACTTGTCTCTCAGTCTAA 675 0.4993 MSEESSEPPSMEANSSEGLLTLKLMVGEPSSSSKPSEDCNNEKIAERAEASNNNQQRKFCCKFCSKKFHSSQALGGHQNAHRRERVLSKIDKELDMGTFGRFGPHFCPYYSTMAGLPFTASPPFHPGLHHHMSPVARYGSQAPANSALEAFRFGSRSSWAEEGAVQRRANRRSNNNVQSSSSPANTKPDESGGTGASANVGGFERNSYVGSIHDTPSASTCLSV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4863g00008 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Pral4863g00008 224 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 30 194 IPR044246 GO:0009788
Pral4863g00008 224 MobiDBLite consensus disorder prediction 164 199 - -
Pral4863g00008 224 MobiDBLite consensus disorder prediction 1 17 - -
Pral4863g00008 224 SUPERFAMILY beta-beta-alpha zinc fingers 56 86 IPR036236 -
Pral4863g00008 224 MobiDBLite consensus disorder prediction 169 193 - -
Pral4863g00008 224 Pfam C2H2-type zinc finger 59 84 - -
Pral4863g00008 224 Gene3D Classic Zinc Finger 32 96 - -
Pral4863g00008 224 ProSitePatterns Zinc finger C2H2 type domain signature. 60 81 IPR013087 -
Pral4863g00008 224 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4863g00008 Pral-Chr4863 52809 53483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4863g00008 34 131 C2H2 Transcription Factor Family AT1G24625 41.837 1.06e-14 68.6