Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4862g00010 ATGATCAGATTTCAGTTTCTCCGTTCACAGTTATGTCTGCTAGTTTCAGTTTCTTGTATTCTTGCTTGTTTGGGAGACAATGACATAGCTGCACAATTGAACGATGATGTTCTTGGTCTGATAGTGTTTAAATCTGACCTTCATGACCCTTCTGCTCATCTTGCTTCATGGAATGAAGATGATGTGAGTGCTTGTTCGTGGCGGTTCGTGCAGTGTAATCAGGCGACCGGAAGAGTTTCTGAGGTCTCACTTGATGGATTAGGCTTATCTGGGAAAATAGGAAGAGGTCTTGAGAGGTTGCAGCATCTTAAGGTATTGTCACTGTCTCATAACAACATAACTGGGAGTATTAGTCCATCACTTGCTCTTTCAAGCACTCTTCAAAGCCTAAACCTTAGCCACAACAGCTTATCTGGTTCTATTCCCAGTTCTTTTGTGAATATGGCTTCAATGAAGTCTCTTGATCTATCAGAGAATTCATTCTCGGGGCAAATCCCAGAAAGCTTGTTTCAGAACTGTTTTTCCCTTCATCATCTTTCTCTGGCTAGGAACATGTTTGAAGGATCAATTCCCAGCTCAATCTCAAGATGTTCTTTATTGAACAGCCTTGATCTTTCAAAAAATCGGTTCAGTGGCAGTGTGGACTTCAATGGGCTTTGGTCTTTGACAAGGCTTAGGACTTTGGATCTGTCAAATAATGCCTTATCTGGAAATTTGCCTCCTGGAATATCAGCCATACATAACTTGAAAGAGATGCTGCTACAAGGTAATCACTTTTCAGGATCATTACCTTCTGATATTGGACTGTGCTTGCATTTGAATAGGTTGGATTTTAGTGATAATCTGTTCAATGAGGCACTTCCAGAGTCACTTGGGAGACTTAATTTTTTGAACTTTTTCAAGGCATCAAATAATTTGTTAACCAGTGAAATTCCTCAGTGGATTGGTAATATGGCAAGTCTGGAATACCTTGATCTCTCAGGCAATCAGTTCTTCGGAACCATCCCAGATTCAATCGGCGATTTGAGATCACTGAGATATCTCAGTCTCTCAAATAACAATCTTATGGGAAACATTCCATCATCATTGGTTTCATGTACTGAGTTATCATCCATTCATCTCAGAGGTAATGGGTTCAATGGTAGCATACCGGAGGGACTGTTTGGCCTGCAATCATTAGAGGAAATAGACCTGTCTCATAATGGGCTGAAGGGTGAAATCCCTGAAGAAATGATTCATGCTTCTAAACTAAAATATTTGAATCTATCTTGGAATGATTTTCACTCCCGAATGCCCCAAGAGTTGGGTATGCTTCAGAATCTGACAGTTTTAGATCTTCAGAGCAATTCACTATATGGTTCTATTCCAGAGGATTTATGTGATTCAGGCAATTTGGCTATTCTTCAAATGGATGGAAACTCATTAGATGGTGCCATCCCAGATGAGATTGGAAATTGCACATCTCTTTACTTGCTGAGCTTGTGTCACAATAATTTGAGTGGTTCAATTCCCAAGTCCATGTCAAAGCTTAAAGAGCTCAAAGTTCTGAAATTGGAATTCAATGAACTGAGTGGAGAGATACCACAGGAGCTTGGAATGCTGCAGAATCTTCTTGCTGTGAATATATCATACAACAGACTCACAGGCAGGCTTCCTAGTGGTAGCATATTTCAAAACTTAGATAAAAGTTCCCTAGAAGGAAACTTGGGTCTTTGTTCACCCTTACTGAAAGGGCCATGTAAGATGAATGTGCCAAAGCCACTGGTTCTTGACCCAAATGCCTATAACAACCAAATGGGTAGGCCAAGAAATGAATCATCCACAAGTACGCCGGGCATCATCCATCGCCACCGGTTCTTGAGTGTTTCTGTTATTATTGCTATTTCTGCAGCATTTTTGATCATATTGGGCGTCATTGCTATAAGCCTTTTGAATGTTTCTGTAAGGAGAAGACTGGATAATGCTTTGGAAAGCATGTGTTCAACCTCTTCAAGATCAGGAACTCCACCCACAGGAAAGCTCATTCTGTTCGATTCAGGCCGGTCCTCACTTGATTCAATCAGCAGCCCAGAAAACTTGCTGAACAAAGCATCCGAGCTGGGAGATGGAGTGTTTGGCACAGTTTACAAGGTTCCTTTGGGATCACAAGGTAGGATGGTGGCAATCAAGAGGCTTGTGACTTCAAACATAGTCCAATACCCAGAAGACTTTGATAGGGAAGTAAGAATCTTAGGGAAAGCAAGGCACCCTAATTTAATAGCATTGAAAGGATACTATTGGACTCCTCAACTGCAACTCTTGGTCACAGAATATGCACCAAATGGTAGCTTGCAAGCCAAGCTACACGACCGGCTTCCTTCATCTCCACCTCTTTCGTGGCCCAACAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGCCTTGCTCACTTACACCATTCATTCCGGCCACCAATCATTCACTACGACTTGAAGCCAAGCAACATTTTACTTGACGAGAACTGCAATCCAAAGATCTCAGATTTTGGGTTGGCCCGGCTATTGACAAAGCTAGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTAGCACCAGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAGTGTGATATCTATGGCTTTGGGGTGATGATTCTTGAGGTTGTGACAGGAAGGAGACCGGTTGAATACGGAGAAGACAATGTTGTGATACTGAATGACCATGTCAGAGTGATGCTTGAGCAAGGAAATGTGTTGGAATGTGTGGATCCAAGCATGAGTGAGTATCCTGAAGACGAGGTTCTCCCGGTTCTGAAGCTTGCATTGGTATGCACTTCACAGATACCTTCAAGCAGGCCTTCCATGGCAGAAGTAGTTCAAATTCTGCAGGTTATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2946 0.4209 MIRFQFLRSQLCLLVSVSCILACLGDNDIAAQLNDDVLGLIVFKSDLHDPSAHLASWNEDDVSACSWRFVQCNQATGRVSEVSLDGLGLSGKIGRGLERLQHLKVLSLSHNNITGSISPSLALSSTLQSLNLSHNSLSGSIPSSFVNMASMKSLDLSENSFSGQIPESLFQNCFSLHHLSLARNMFEGSIPSSISRCSLLNSLDLSKNRFSGSVDFNGLWSLTRLRTLDLSNNALSGNLPPGISAIHNLKEMLLQGNHFSGSLPSDIGLCLHLNRLDFSDNLFNEALPESLGRLNFLNFFKASNNLLTSEIPQWIGNMASLEYLDLSGNQFFGTIPDSIGDLRSLRYLSLSNNNLMGNIPSSLVSCTELSSIHLRGNGFNGSIPEGLFGLQSLEEIDLSHNGLKGEIPEEMIHASKLKYLNLSWNDFHSRMPQELGMLQNLTVLDLQSNSLYGSIPEDLCDSGNLAILQMDGNSLDGAIPDEIGNCTSLYLLSLCHNNLSGSIPKSMSKLKELKVLKLEFNELSGEIPQELGMLQNLLAVNISYNRLTGRLPSGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQMGRPRNESSTSTPGIIHRHRFLSVSVIIAISAAFLIILGVIAISLLNVSVRRRLDNALESMCSTSSRSGTPPTGKLILFDSGRSSLDSISSPENLLNKASELGDGVFGTVYKVPLGSQGRMVAIKRLVTSNIVQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEYAPNGSLQAKLHDRLPSSPPLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYDLKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGVMILEVVTGRRPVEYGEDNVVILNDHVRVMLEQGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4862g00010 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 289 383 - -
Pral4862g00010 981 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Pral4862g00010 981 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 194 288 - -
Pral4862g00010 981 CDD STKc_IRAK 700 968 - -
Pral4862g00010 981 Gene3D Ribonuclease Inhibitor 34 190 IPR032675 -
Pral4862g00010 981 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 772 976 - -
Pral4862g00010 981 SMART LRR_typ_2 148 172 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 510 534 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 342 366 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 100 125 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 390 414 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 318 341 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 438 462 IPR003591 -
Pral4862g00010 981 SMART LRR_typ_2 222 246 IPR003591 -
Pral4862g00010 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
Pral4862g00010 981 SMART serkin_6 694 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4862g00010 981 Gene3D Ribonuclease Inhibitor 191 286 IPR032675 -
Pral4862g00010 981 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Pral4862g00010 981 SUPERFAMILY L domain-like 323 573 - -
Pral4862g00010 981 Pfam Leucine rich repeat 303 355 IPR001611 GO:0005515
Pral4862g00010 981 Pfam Leucine rich repeat 368 427 IPR001611 GO:0005515
Pral4862g00010 981 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Pral4862g00010 981 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 328 968 - -
Pral4862g00010 981 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Pral4862g00010 981 Gene3D Transferase(Phosphotransferase) domain 1 776 978 - -
Pral4862g00010 981 PRINTS Leucine-rich repeat signature 222 235 - -
Pral4862g00010 981 PRINTS Leucine-rich repeat signature 127 140 - -
Pral4862g00010 981 Gene3D Ribonuclease Inhibitor 292 583 IPR032675 -
Pral4862g00010 981 FunFam Inactive leucine-rich repeat receptor-like protein kinase 393 583 - -
Pral4862g00010 981 SUPERFAMILY L domain-like 50 377 - -
Pral4862g00010 981 SMART LRR_sd22_2 222 251 - -
Pral4862g00010 981 SMART LRR_sd22_2 342 361 - -
Pral4862g00010 981 SMART LRR_sd22_2 100 132 - -
Pral4862g00010 981 SMART LRR_sd22_2 390 422 - -
Pral4862g00010 981 SMART LRR_sd22_2 438 461 - -
Pral4862g00010 981 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 688 771 - -
Pral4862g00010 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Pral4862g00010 981 ProSiteProfiles Protein kinase domain profile. 694 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4862g00010 981 Pfam Protein kinase domain 696 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4862g00010 981 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pral4862g00010 981 SUPERFAMILY Protein kinase-like (PK-like) 694 976 IPR011009 -
Pral4862g00010 981 Gene3D Phosphorylase Kinase; domain 1 694 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4862g00010 Pral-Chr4862 104617 108125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4862g00010 25 978 Receptor kinase-like Gene Family AT3G28040 62.525 0.0 1187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pral4862g00010 Pkinase 2.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4862g00010 - - gmx:100813764 1495.72