Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4860g00029 ATGATTTTTACACATTCTAGTGGAGCAATGCTATTTCTTAAATTATACTCCACTCTTTCACATTCTCTGGATAATTTGTCCTCTATTACTTCCAGAACCTTTCTTCCTCTGCTCTCTACTGTCTCTTCAACTAAATCCTCAAAGGAACGCATTCTTGTACTTGATTACCTAAGTTCAAACTTCAAATTCTCAAAAACTCAGTCCAGCTATATCTCAGAACGAGTTTTTCATGCTAGGCGCCCTCAACAACCCTTCATCGTGCTGAATTATTTTCAAAAGATTGGATTTACTGAAGCCCATATTCAATCTATGGTATGTCGAACACCCCAAATACTATTTTCTGATATTGATAAAACCCTGGAGCCAAAAGTTGAGTACTTTCATCAACTGGGCTTTGCTGTTTCTGAGCTGGGAAAGTTCCTATCCAAGAATTCAACTCTTTTGATTTCGAGTTTGAATAAAACCTTGGCCCCCTCTGTGGAGACTGTTAGGAAAATTGCTTGCAATGAGAAAGATCTTGTTAGACTGTTGCACAGAACTGGCCGGGTACTTCTAAGTCACAAAAAAATTTTGCGCAGTGTTGCCTTCTTTCAGAGTTGTGGGATCGTTGGGTCTCAGCTTTTATATCTATTCGAAAGACAATCTCTGCTTTTCACCAAACCGGAGTCTCTGCTTCAAAACCTTGTTTCACGGGCTGCAGACCTCGGTTTCCATGTAAATTCAAGAATGTTAGTGCACGCAATCCTTGTTGTCCATGGTTTGACTGCTGAAGCTTTTGAAAGAAGGGTGAGTTTAATTCAGAGTTATGGGTTTTCCAAAGATGAGAGCTCACAAATGCTCAGAAGAGCTCCATTTTTGCTTCGATCAGCTGAGGAGAAACTAAAGTTTGGATTTGAATTCTTCTTGAATGCAGTTATGCTACCTAAGTCGGTGCTTGTTCAAAGACCTATGATTTTGATGTATAGCATGGAAGATAGGGTGATTCCTCGGTACAGAATTTTGCAGCTGTTAATCTCTGAAAATTTACTTAAGAAGAATCCAAGTTTCGTTGAAATGTTAGAAATGCGTGAGGATATGTTCTTGAAGAAGTATATTTTGAAGTTCAGATATAAAGCAGAGACTTTATTACTGGCTTACAAAAGTCACCATCTTGAAGATTTTTCTTGA 1167 0.3847 MIFTHSSGAMLFLKLYSTLSHSLDNLSSITSRTFLPLLSTVSSTKSSKERILVLDYLSSNFKFSKTQSSYISERVFHARRPQQPFIVLNYFQKIGFTEAHIQSMVCRTPQILFSDIDKTLEPKVEYFHQLGFAVSELGKFLSKNSTLLISSLNKTLAPSVETVRKIACNEKDLVRLLHRTGRVLLSHKKILRSVAFFQSCGIVGSQLLYLFERQSLLFTKPESLLQNLVSRAADLGFHVNSRMLVHAILVVHGLTAEAFERRVSLIQSYGFSKDESSQMLRRAPFLLRSAEEKLKFGFEFFLNAVMLPKSVLVQRPMILMYSMEDRVIPRYRILQLLISENLLKKNPSFVEMLEMREDMFLKKYILKFRYKAETLLLAYKSHHLEDFS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4860g00029 388 PANTHER CGI-12 PROTEIN-RELATED 50 367 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 FunFam Mitochondrial transcription termination factor-like 152 372 - -
Pral4860g00029 388 Pfam mTERF 256 360 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 Pfam mTERF 53 213 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 Gene3D Transcription termination factor 3, mitochondrial 167 369 IPR038538 -
Pral4860g00029 388 SMART mt_12 174 203 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Pral4860g00029 388 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4860g00029 Pral-Chr4860 484043 487982 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4860g00029 mTERF 2.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4860g00029 K15031 - qsa:O6P43_021347 329.717