Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4860g00027 ATGGGGCATTTAAAGAGAATGGGTTTGCATCGTTTTGGATCATTGCATTTTCACAGATTGAACCCTGCACTTTCGTATTCTCTTTGCAATTCTTCCAGAACCTTTCTCTCTCTGTTCTCTACTGTTGCTTCTTCCCCATCTCCGGCCTCGGCGGAACAAATTTCCATCGTTGATTATCTAAGCACCAACTTCAAATTCTCTAAAGCTCAATCCGTCCGTATCTCAAAACGACTCTCTAAGATTAGGTCTCCTCAGCATCCATGGACGGTGCTTGATTATTTTAAACAGATTGGACTTTCTGAATCGCAGATTCAAACTACGATTAGTCGTCAACCCGAAATATTGTTATCACATGTGGATAAAACCCTGAAGCCAAAAATTGAGTACTTCCAGCTTCTAGGGTTTCAGGGTCTTGAGTTGGGTGAGTTTCTCTCAAAGAATGGACTTCTTCTGATGCGTAGTTTGAATAAAGCTGTGGTGCCCTGTGTGGAATGTCTAAGGAAACTTCTTAATGATGAGAAAGATTTAATTAAGCTGCTTCGAAGACATGCCGAGTGGATAATTCCAAACCAACAGAGGGTTTTGGACAATGCTGCTTTCTTCAAGAGTTGTGGGATCGTTGGGTCTCAACTTTCAGTTTTACTAACACGTCGCCCTCGTCTTTTTGTAACAAGACAGTCCCTGCTTCGAAACTATGTCTCGCGGGCTGTAAACATGGGTTTCTCCATAGACTCGGGAATGTTGGTATATGGCTTCCGGATAATTAGTGATATGAGCATTGTTATGTTTAACAGAAAGGTGGAAATAATTCAGAGCTGTGGGTTTTCCAAAGATGAGGCCATGCAAATGTTTAGAAGAAGTCCAGGGTCACTTGGCATGTCTGAGAAGAGGCTAAAGTTTAAAATTCAGGTGTTCTTGGATAAAATTATGCTGCCTAGGTCACTACTGGTTAATAACCCTGTGATTTTGACGATGAGCATGGAGAAAAGGGTGATTCCTCGCTGGAGGGTACTGCAACTGCTAATGTCAAAAAATTTACTCTAG 1044 0.4176 MGHLKRMGLHRFGSLHFHRLNPALSYSLCNSSRTFLSLFSTVASSPSPASAEQISIVDYLSTNFKFSKAQSVRISKRLSKIRSPQHPWTVLDYFKQIGLSESQIQTTISRQPEILLSHVDKTLKPKIEYFQLLGFQGLELGEFLSKNGLLLMRSLNKAVVPCVECLRKLLNDEKDLIKLLRRHAEWIIPNQQRVLDNAAFFKSCGIVGSQLSVLLTRRPRLFVTRQSLLRNYVSRAVNMGFSIDSGMLVYGFRIISDMSIVMFNRKVEIIQSCGFSKDEAMQMFRRSPGSLGMSEKRLKFKIQVFLDKIMLPRSLLVNNPVILTMSMEKRVIPRWRVLQLLMSKNLL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4860g00027 347 Pfam mTERF 90 270 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 Pfam mTERF 263 346 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 Gene3D Transcription termination factor 3, mitochondrial 161 347 IPR038538 -
Pral4860g00027 347 PANTHER CGI-12 PROTEIN-RELATED 54 343 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 64 100 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 177 207 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 246 276 IPR003690 GO:0003690|GO:0006355
Pral4860g00027 347 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4860g00027 Pral-Chr4860 445997 447040 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4860g00027 mTERF 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4860g00027 K15031 - aew:130752103 278.87