Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4860g00021 ATGAATGGACTTTCTGAATCGCAGATTCAGTCTATGATTAGTCTTAAACCCCAAATATTGTTCTCAAGTGTGGATAAAACCCTGAAGCCAAAAATTGAGTACTTGCAGCTTCTAGGGTTTCAGGGATATGGGAGGTGGATAATCTCAAACCAACAAAGGGTTTTCAACAATGCGGCTTTCCTCAAGAGTTGTGGGATCGTTGGGTCTCAACTTTCATTTTTACTGACACATAACGCTAGTCTTTTTGTAATAAGAGAGTCCCAGCTTCGAAGCTATGTTTCGTGGGCTGTAAACTTGGGTTTCTCCATAAACTCAGGGATGTTGGTACATGGGCTCCGGACAACTACTAGCATGAGCATTGGCAAATTTGAGAACAAGTTGGAAGTAATTCAGAGCTGTGGATTTTCCAAAGATGAGACCATGCAAATGTTCAGAAGATCTCCAGGATTGCTTAGCAGATCTGAGGAGAGGCTGAAGTTTAAAATTCAAGTGTGCTTGGTTAAAATTATGCTGCCGAAGTCACTACTGGTTAATAGCCCTGTGATTTTGATGTTGAGCATGGAGAAAAGGGTGATTCCTCGATGGAGGGTACGGAAATTGCTAGTCTCAAAAAATTTACTTAACGAGAATCCCAGTTCTCTTCAAGTGCTTCTTTTGCAGGAGAAGAAATTCTTGAAGAAATATATTTCCAAATTTAGAGATAATGAAGAGGCTTTATTGGAGGCTTACAAGGGCCCACCATTTGGAAGATGCTTCTACATAATAGTGATAATTAAGTCTAGTACTATCTCCGTTTCTTAA 801 0.3995 MNGLSESQIQSMISLKPQILFSSVDKTLKPKIEYLQLLGFQGYGRWIISNQQRVFNNAAFLKSCGIVGSQLSFLLTHNASLFVIRESQLRSYVSWAVNLGFSINSGMLVHGLRTTTSMSIGKFENKLEVIQSCGFSKDETMQMFRRSPGLLSRSEERLKFKIQVCLVKIMLPKSLLVNSPVILMLSMEKRVIPRWRVRKLLVSKNLLNENPSSLQVLLLQEKKFLKKYISKFRDNEEALLEAYKGPPFGRCFYIIVIIKSSTISVS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4860g00021 266 Gene3D Transcription termination factor 3, mitochondrial 44 234 IPR038538 -
Pral4860g00021 266 Gene3D Transcription termination factor 3, mitochondrial 1 43 IPR038538 -
Pral4860g00021 266 Pfam mTERF 119 225 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 PANTHER CGI-12 PROTEIN-RELATED 3 232 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 SMART mt_12 173 207 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 SMART mt_12 10 41 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 SMART mt_12 106 136 IPR003690 GO:0003690|GO:0006355
Pral4860g00021 266 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4860g00021 Pral-Chr4860 426914 427790 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4860g00021 mTERF 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4860g00021 K15031 - qsu:111994264 215.698