Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4860g00010 ATGGCGTCTGATTCGAATGGACCTGCATCTGATAATACCCTCCGGTCTATCTGTTACAAGCGGGGTTCGCTTCAGCTTCTTGATCAGAGAAAGCTCCCTCTAGAAACAGTTTATTTGGACATTCAGAATTCAACAGATGGCTGGAGTGCCATAAAAGATATGGTGGTCCGAGGAGCACCTGCTATTGCCATCGCAGCAGCACTTTCTTTGGCTGTTGAAGTTTCCAATCTAGAGGCATTTAATGGGTCACCTCATGATGCAGGAAGCTTCCTCGGAAAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTTTCAGACGCTGTAACTAAACTCAAAGAAGTTATATCTAAGGCTGTTGCTTCTACTACGGAGGCCAAGAGTGTTTTTCAGGCGTATATAGAAGCTTCTGAGATTATGCTTGAGGATGATGTTGCCTCAAATAGAGCAATTGGTTCTTTTGGAGCTAGTATTATTCAACAACAGACAGGGAAAATAAAGCTTTCTGTCTTGACCCATTGCAACACTGGAAGTCTTGCCACTGCTGGATATGGTACTGCTCTGGGTGTGATTCGTGCACTTCATAGTGAAGGGGTTTTAGAAAGGGCCTATTGCACAGAAACACGCCCATTCAATCAGGGATCTAGGCTCACGGCCTATGAGTTGGTGCATGAACGCATACCTGCAACTCTTATAGCAGATTCTGCGGCAGCTGCACTGATGAAAGCTGGACGAGTAGATGCTGTTGTTGTTGGGGCAGATCGTGTTGCATCAAATGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTGTGCGCCAAGTTTCATAATGTACCCTTTTATGTGGCTGCCCCTTTGACTTCCATTGATCTATCACTTTCTTCCGGACAAGAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATGCACGTGGAGGACTTGGAGAGGCCGTTGCCGCACCAGGAATTTCTGTGTGGAACCCCGCATTTGATGTCACACCGGCTGCTTTGATTTCCGGTATCGTCACAGAGAAGGGTGTCATTACCAAAACAAGTGATGATACATTCGACATAAAAGCTTTCGCACAGAAGACAGGTTATGCCAAGGGCTGA 1134 0.4568 MASDSNGPASDNTLRSICYKRGSLQLLDQRKLPLETVYLDIQNSTDGWSAIKDMVVRGAPAIAIAAALSLAVEVSNLEAFNGSPHDAGSFLGKKLDYLVSSRPTAVNLSDAVTKLKEVISKAVASTTEAKSVFQAYIEASEIMLEDDVASNRAIGSFGASIIQQQTGKIKLSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCTETRPFNQGSRLTAYELVHERIPATLIADSAAAALMKAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNARGGLGEAVAAPGISVWNPAFDVTPAALISGIVTEKGVITKTSDDTFDIKAFAQKTGYAKG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4860g00010 377 Pfam Initiation factor 2 subunit family 56 356 IPR000649 GO:0044237
Pral4860g00010 377 FunFam Methylthioribose-1-phosphate isomerase 169 366 - -
Pral4860g00010 377 FunFam Methylthioribose-1-phosphate isomerase 12 203 - -
Pral4860g00010 377 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 42 357 IPR011559 GO:0044249
Pral4860g00010 377 Gene3D - 12 168 IPR027363 -
Pral4860g00010 377 Gene3D - 169 372 IPR042529 -
Pral4860g00010 377 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 366 IPR005251 -
Pral4860g00010 377 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 11 371 - -
Pral4860g00010 377 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 15 357 IPR005251 -
Pral4860g00010 377 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 359 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4860g00010 53 371 Eukaryotic Initiation Factors Gene Family AT2G05830 79.688 4.87e-179 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4860g00010 K08963 - gmx:100799311 558.525