Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4858g00002 ATGATAGACTCAGAGGTGGACCCGCCATCGACAACGGCGACACCGGCGCCACTGTTCTCGTCGGGAAGGGTGGATTCACTGTCATCCACTCAGAATTCGATGCCCTTAAAGTGTGAGTGTATACCAACAATCAGGACTCATTCCAGCTTCTCCATTCGCAACGCCTCTCTCTCACGCAAGACAGGAGCAGAGTTTTTGGGCACCTTCATATTGATGTTTGCAGCATCGGCAGGACCCATATTGAACCAGAAATACAACGGCGTTGAGGGCCTCATCGGAAACGCTGCTTGCTCCGGCTTAGCCGTCACAATCGTGGTCTTGTCCATTGGCCACATCTCCGGCGCTCACCTCAACCCCTCCGTCACCATCGCCTTCGCCGCCTTCCGCCACTTCCCCTGGGTCCACGTCCCCGCCTACATCCTCGCTCAGGTCGCCGCCTCCATCTGCGCCTCATTCACCGTCAAGGGCATCTTCCATCCGCTGGTGAACGGAGAAGTGACCGTCCCTTCCGTGAGTACGAGTCTTGGACAGGCTTTTGTGCTGGAGTCCATCATCACTTTCAATCTTATGTTCGTTATCACTGCCGTCGCTACTGATACTCGCGCTGTTGGAGAAATGGCTGGGATTGCTATTGGAACCACAGTTTTGCTCAACATTCTCATTTCTGGGCCGGCAAGTGGGGGATCAATGAACCCGGTGAGGACGTTGGGGGCAGCGGTGGCGGTGGGAAATTACAAGGACTTATGGCTATACTTCATTGCGCCCACCATCGGAGCTCTGGCCGGCGCCGGTGCTTATACTATGATCAAGCTCCGGGACGACGACCCCAACCCACAACATCAAGTTTGA 849 0.5524 MIDSEVDPPSTTATPAPLFSSGRVDSLSSTQNSMPLKCECIPTIRTHSSFSIRNASLSRKTGAEFLGTFILMFAASAGPILNQKYNGVEGLIGNAACSGLAVTIVVLSIGHISGAHLNPSVTIAFAAFRHFPWVHVPAYILAQVAASICASFTVKGIFHPLVNGEVTVPSVSTSLGQAFVLESIITFNLMFVITAVATDTRAVGEMAGIAIGTTVLLNILISGPASGGSMNPVRTLGAAVAVGNYKDLWLYFIAPTIGALAGAGAYTMIKLRDDDPNPQHQV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 59 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 PANTHER AQUAPORIN NIP2-1 45 273 IPR034294 -
Pral4858g00002 282 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Pral4858g00002 282 Gene3D Glycerol uptake facilitator protein. 29 281 IPR023271 -
Pral4858g00002 282 Pfam Major intrinsic protein 53 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4858g00002 282 SUPERFAMILY Aquaporin-like 55 276 IPR023271 -
Pral4858g00002 282 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4858g00002 Pral-Chr4858 23645 27179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4858g00002 18 278 Major Intrinsic Protein MIP AT4G10380 63.603 4.81e-122 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4858g00002 K09874 - csav:115710810 382.874