Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4854g00006 ATGAGTTTATACAGAAGTGGAACCTTGTTTATCTATGTGTTTTTTCTGCTAAGAGTGTGTCTGGCGGACCATCAACACATAAGCCAGATTTATCCCAGATTCGAGGCATCTCAGCTGGACTGGAATGACCATGGTGGATTGTTCTTACTATCCAACAACTCGGCTTTTGCTTTTGGATTCTTCGGTACTCTCGATGTTTCCCTATTTGTTTTAGTTGTCATTCACTTGAAAAGCTATAAAGTGGTTTGGACTGCTAACAGAGGCTTGCTGGTAAGAAACTCTGATAAATTTGTGTTTGACAATACTGGAAATGCATATCTGGAAAGAGGGGGTGGTGTGGTTTGGGCAACCAACACAGGAGGACGTAAAGTTAGAGCCATGGAACTGAAGGATTCAGGAAATTTGGTGCTTATTGATGAAGAAGGAAGAGTGATTTGGCAGAGTTTTAGCCATCCTACCGATACCCTTTTGCCTGATCAACTTTTTGTTGAAGGAATGAGTCTCAAAAGCTTCCGTAACCGCAATAACTTGTTTAGTTATCTTACTTTTATGTCTGATGATTTGGTTTTATATGCTGGATATGATCCTCCTCAGATATACTGGTCCTTATCAAGCGAAAGCAATGTCAGTAAGGGGGCTCATTTTCATTCTGCTTCTTTGGTTTCAAATTCTTGGAATGTCTATGACAGAAGTGGAGCTTTAAAATGGCAATCCGTCTTCTCTGATAAATCTGATCCGAAGGCAATGTGGGCTGCTATATTAGATCCTAATGGTGCAATCTCTTTTTATGATCTGAACAAGGGAAAATCAGCTACCCCTGAAGCAACTAGAATACCACAAGATCCTTGTGGTATTGCTGAGCCTTGTGATCGTTATTATGTTTGCTTCTTCGAGAACTGGTGTGAATGTCCTGCACTTCTCAAATCTCGTTTTAATTGCAAGCCTCCAAACGCCACCTCATGTTCTAGAACCCAAGAAGACCTTCTGTATGTCGGTGAAAAGCTCGATTACTTTGCCCTCAAGTATGTTCAGCCAGTTTCTAAATCATCCCTGAGCGCTTGCCAAGAAGGCTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTATGAAAACAGTACAGGAAAGTGCTACCATTTTGATCAGACAGGAAGTTTCCAACGCTCTCAGGCGAATTCTGGAGGCTATGTTTCATTCATGAAGATCTCCATTGAAGATGGAGATGGAAGAAAAAGAAGGCATCAGACTGTACTAGTTGTTGTTGTAGTTATTTTCGTAATTCTGATTATTATTGCACTTGTGTTAGGATTCTGGCATTACTGCAAAAATAAGCATCTCTTGGAGAATTCTCCAGAAACGTTGGAGGAGGAGGATGATTTCTTGGACAATCTTCATGGTATGCCAACTCGTTTTAGGTATAGTACTCTAAGTCAAGCCACCAAGAATTTCTCTACAAAAATTGGTGAAGGAGGATTTGGCTCAGTTTATCTTGGCGTGCTTGACGATGGATCTCAATTGGCTGTGAAGAAACTGGAAGGATTAGGACAAGGGGCAAAAGAGTTCAAAGCTGAAGTTTCCAGCATTGGAAGTATTCACCATGTTCATCTGGTGAAGCTGAAGGGCTTCTGCGCCGAAGGCCCTCATCGCCTTCTGGTGTACGAATACATGGCAAGAGGCTCTCTGAACAAATGGATCTTTAGAAGCCATGAAAATGCTTTCTTGCTGAATTGGAATACCAGATTCAACATTGCATTAGGTACAGCAAGGGGATTGGCCTATCTTCATGAGGAGTGTGAGCTGAAGATCATACACTGTGATATCAAACCAGAGAATGTCCTTCTTGATGAAAACTTCACAGCTAAAGTTTCAGACTTCGGTTTGTCTAAGCTCATGAGCCGCGAACAGAGCCATGTTTTCACAACACTAAGGGGAACAAGAGGGTATCTGGCACCAGAATGGATCACCAACTATGCAATTTCAGAAAAGAGTGATGTGTACAGCTATGGGATGGTCCTGCTTGAGATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCAGAGAAAGCGCATTTTCCTTCATATGCTTTTAGGATGATGGAAGAAGGAAAATTGAAGCAAATTCTTGACCCAATGATAGACGTTGAAGAGAATGATGAAAGATCTCTCACTGCAGCCAAGGTTGCTCTTTGGTGCGTCCAAGATGACATGAGTTTAAGGCCTCCAATGACCAAAGTTGTTCAAATGCTTGAAGGTGTTATCCCTGTACCTGAGCCCCCATCATTATCTACTTCAAGTTCTTATTCATCATTCCTAAAAATGGGTAATGACCAAGCTTCTTCATCAACACAGGGTTCTTTTTACAGCAATGTACCCCTATCCTGCGTTCAGTTATCAGGACCTAGATGA 2409 0.4172 MSLYRSGTLFIYVFFLLRVCLADHQHISQIYPRFEASQLDWNDHGGLFLLSNNSAFAFGFFGTLDVSLFVLVVIHLKSYKVVWTANRGLLVRNSDKFVFDNTGNAYLERGGGVVWATNTGGRKVRAMELKDSGNLVLIDEEGRVIWQSFSHPTDTLLPDQLFVEGMSLKSFRNRNNLFSYLTFMSDDLVLYAGYDPPQIYWSLSSESNVSKGAHFHSASLVSNSWNVYDRSGALKWQSVFSDKSDPKAMWAAILDPNGAISFYDLNKGKSATPEATRIPQDPCGIAEPCDRYYVCFFENWCECPALLKSRFNCKPPNATSCSRTQEDLLYVGEKLDYFALKYVQPVSKSSLSACQEGCLRNCSCLVLFYENSTGKCYHFDQTGSFQRSQANSGGYVSFMKISIEDGDGRKRRHQTVLVVVVVIFVILIIIALVLGFWHYCKNKHLLENSPETLEEEDDFLDNLHGMPTRFRYSTLSQATKNFSTKIGEGGFGSVYLGVLDDGSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLNKWIFRSHENAFLLNWNTRFNIALGTARGLAYLHEECELKIIHCDIKPENVLLDENFTAKVSDFGLSKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMEEGKLKQILDPMIDVEENDERSLTAAKVALWCVQDDMSLRPPMTKVVQMLEGVIPVPEPPSLSTSSSYSSFLKMGNDQASSSTQGSFYSNVPLSCVQLSGPR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4854g00006 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Pral4854g00006 802 SMART serkin_6 480 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4854g00006 802 Pfam D-mannose binding lectin 81 160 IPR001480 -
Pral4854g00006 802 SUPERFAMILY Protein kinase-like (PK-like) 464 751 IPR011009 -
Pral4854g00006 802 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Pral4854g00006 802 Gene3D Phosphorylase Kinase; domain 1 448 554 - -
Pral4854g00006 802 FunFam serine/threonine-protein kinase PBS1-like 448 554 - -
Pral4854g00006 802 CDD PAN_AP_plant 346 402 - -
Pral4854g00006 802 CDD B_lectin 45 152 IPR001480 -
Pral4854g00006 802 Pfam PAN domain 342 390 IPR003609 -
Pral4854g00006 802 ProSitePatterns Protein kinases ATP-binding region signature. 486 509 IPR017441 GO:0005524
Pral4854g00006 802 SMART blect_4 40 152 IPR001480 -
Pral4854g00006 802 Gene3D Transferase(Phosphotransferase) domain 1 555 754 - -
Pral4854g00006 802 Pfam Protein kinase domain 483 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4854g00006 802 FunFam S-receptor-like kinase 5 555 759 - -
Pral4854g00006 802 PIRSF SRK 4 798 IPR024171 GO:0004674
Pral4854g00006 802 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 761 - -
Pral4854g00006 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 203 IPR036426 -
Pral4854g00006 802 ProSiteProfiles PAN/Apple domain profile. 321 402 IPR003609 -
Pral4854g00006 802 Gene3D - 44 151 IPR036426 -
Pral4854g00006 802 CDD STKc_IRAK 486 752 - -
Pral4854g00006 802 ProSiteProfiles Protein kinase domain profile. 480 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4854g00006 Pral-Chr4854 24368 27736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4854g00006 417 760 Receptor kinase-like Gene Family AT5G20050 45.604 1.09e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4854g00006 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4854g00006 - - gmx:100786024 1177.93