Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4851g00001 ATGGCAAGTCAAAGTGATCATCAAGCAAAACCGAGCTTTGGTTTTGCTTTAATGGAGGCGTCGTCGGAGTTGAAGGATATCAACCAGAAAAGTAGTAATCATCATCATGCAGCTGCAGATTCAGAAGGGATTCTTGAGAATATATGGGCTAGGGTTGTAAACACAGCAGAATCATCGAAGTCATGGGAAGGGCTTCCGAATCTTGATGGAAGAGATGAATCAAAGGAGATCCTACAAAGGCTTCCAAGTTTGGGAAGATGGATATCAATGGGAGCTGAGGCATGGGAAGAAATTTTAGCTGATTTTCCACAGAATCTTCTTCAAGACACATGCAATTATAACAACAATCTGGGAAATTTCTGCAGAAACATTGAATCCAATTGTAAAAATGTAGAACAACAAGAAAAAGAAGAAGTAGATGGCACTGTGAGGCCAAAGAATATGGAAGGTGAAAAAAGAAGACACTATAGAGGAGTGAGAAGAAGGCCATGGGGAAAATATGCAGCAGAAATCAGGGACTCATCAAGGAATGGAGCTAGAGTTTGGCTTGGAACATTCGAAACAGCTGAAGAAGCAGCTTTAGCTTATGATAAGGCAGCTTTGAGAATTAGAGGTCCTAAGGCATATTTGAATTTCCCAATTGAGATTGTTGCGAATGCTTTAGGGTTTGATCTCAAAGGAAGTGACAGTGTCAATAATAAACCAATTATTACTAACTCTGCTTCAACTTGTGAGGAGCATTATTATTCCAGGAAAAGAAGATTGAGAAATATTGAAGAACCTGCGGCTAAAAAGATGGCGAATTTGGGGGATGAAGTAGATGTTGTTGTGTTTCAGGACTTGGGGAGTGATTACTTGGAGAGTTTATTATCTTCCTTTTGA 882 0.3968 MASQSDHQAKPSFGFALMEASSELKDINQKSSNHHHAAADSEGILENIWARVVNTAESSKSWEGLPNLDGRDESKEILQRLPSLGRWISMGAEAWEEILADFPQNLLQDTCNYNNNLGNFCRNIESNCKNVEQQEKEEVDGTVRPKNMEGEKRRHYRGVRRRPWGKYAAEIRDSSRNGARVWLGTFETAEEAALAYDKAALRIRGPKAYLNFPIEIVANALGFDLKGSDSVNNKPIITNSASTCEEHYYSRKRRLRNIEEPAAKKMANLGDEVDVVVFQDLGSDYLESLLSSF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4851g00001 293 SUPERFAMILY DNA-binding domain 155 215 IPR016177 GO:0003677
Pral4851g00001 293 PANTHER DNA-BINDING DOMAIN 123 288 IPR044808 GO:0003700|GO:0009873
Pral4851g00001 293 PRINTS Ethylene responsive element binding protein signature 179 195 IPR001471 GO:0003700|GO:0006355
Pral4851g00001 293 PRINTS Ethylene responsive element binding protein signature 156 167 IPR001471 GO:0003700|GO:0006355
Pral4851g00001 293 Pfam AP2 domain 155 205 IPR001471 GO:0003700|GO:0006355
Pral4851g00001 293 SMART rav1_2 155 219 IPR001471 GO:0003700|GO:0006355
Pral4851g00001 293 FunFam Ethylene-responsive transcription factor 2 154 215 - -
Pral4851g00001 293 CDD AP2 163 214 IPR001471 GO:0003700|GO:0006355
Pral4851g00001 293 Gene3D AP2/ERF domain 154 216 IPR036955 GO:0003700|GO:0006355
Pral4851g00001 293 ProSiteProfiles AP2/ERF domain profile. 155 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4851g00001 Pral-Chr4851 2917 3798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4851g00001 44 293 AP2-EREBP Transcription Factor Family AT4G18450 34.375 8.72e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4851g00001 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4851g00001 - - pcin:129287234 378.252