Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4850g00001 ATGGGCGGCTTCACATCTTCAACCGCCACCTCCGGCGACCGAATCTGCGCCCACTCAATCGACGAAGACGACGGGGATTTCACATCCACCACCGTGTCGGAAGCCGAGACGGAGACCCAGAGGAGCTGGAAGAATTCGAGTAACGTGATGGCGAAGCAGAGTCCGATAGTGAACAGCGTGGCGGTGGAGAAGGAGTCGGAGGATCCGTACAAGGATTTCCGGCACTCGATGCTGCAGATGATATTTGAGAAGGAGATGTACTCGGAATCCGATCTGGAGGAGCTTCTGGAAGCATTCCTGGAGCTGAACTCGCCGAGACAGCACGAGGTGATCGTGAAGGCGTACACGCAAATCTGCGAAGATGCGTTTCCAAATAATGATAATAACAAGAAGACGACGACGAACAAGAGCAAGGGGATGAGGCGTTATGGTCACGTGAGGAATCAGCCAGCGGCACGTGCGTAG 465 0.5462 MGGFTSSTATSGDRICAHSIDEDDGDFTSTTVSEAETETQRSWKNSSNVMAKQSPIVNSVAVEKESEDPYKDFRHSMLQMIFEKEMYSESDLEELLEAFLELNSPRQHEVIVKAYTQICEDAFPNNDNNKKTTTNKSKGMRRYGHVRNQPAARA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4850g00001 154 NCBIfam uncharacterized plant-specific domain TIGR01568 60 119 IPR006458 -
Pral4850g00001 154 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 28 123 IPR038933 GO:0045892
Pral4850g00001 154 MobiDBLite consensus disorder prediction 122 154 - -
Pral4850g00001 154 Pfam Transcriptional repressor, ovate 66 121 IPR006458 -
Pral4850g00001 154 ProSiteProfiles OVATE domain profile. 62 121 IPR006458 -
Pral4850g00001 154 MobiDBLite consensus disorder prediction 1 50 - -
Pral4850g00001 154 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4850g00001 Pral-Chr4850 2876 3523 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral4850g00001 Ovate 9.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4850g00001 - - pcin:129314681 209.149