Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral484g00010 ATGGAAGAATCAGGCAAATTACCATCAGAAGAGAACAAAGGCTCTATGGAGAAAAATAAGAAGAGAAAACTCAAAACGCCTGCTCAGGTTTATGCTTTGGAGAAATTTTATAACGAGCACAAATATCCCACTGAGGAAATGAAATTAGAACTTGCTGAGGAAGTGGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCACCGAAGGCTAAAAGATAAAAGACTGTTGAAAGATGAAGCTTTTGCTAATGGGCGACCAGATATTTCAAGCGGTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATTGTGATTATAGGCATCTTGATCCCAAAGAGGTTGAGAGTCGTGGCCTTTATGGTGGTCATGATATTTTAGTTTCAGATATGGCCTATGAACGTAGGAATCATTATTCCGAAAATGTTGGTGCAATGGATGAAACATCATCTGAGAGCAGCTCATCTTTGCAAGAAAAGGATTCATATGATGCTGAGCCTTCCGGATATCTAACACCTGACGGAGCTCTACCAACTAAAATTCCCAAGGCTGCCACAAACATGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATAGAAAACCCTGTTATAACTTCTGTTAAGAAGCAATTAGGAAGAAATTATCGGGAAGATGGTCCACTACTTGGTATTGAATTTGATCCACTTCCTCCAGGGGCATTTGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCGAATCGTGCTCTTAACTACTCTCCTGAAATTTCTGCTGTGAAAAGGCAACCCGGTCTTTGTGCTAGATATGATTCGTATAATACCGAATTGTATCTGGAAGATTCTCATATGGAAGGAGAAAACCTCTCTGATTTCCAGGATAAGAAGTCTCATCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTTTCGATTTCCTAGCACAAACTCTTCTCTGGATATGTATGAACATTCTGTCGGAGAAGCACCTGCATATAATAGAAAAGACAATCGTAGAGTCGGCATCAGGCATGGCTTTGAAGGGTTGAAATCTGATTATGCTTCTAATCATAGTGATCACTATGATGGTAACCTTGCAGCAAACTTAAAAGACTCACTGTTGCATGGATATGATAATGTCGATTTGAAGAATGCTCAGAGTGAATATGTAAAACCTAAGCCTTCAAACCTGATCAGGAATCCTTTTGTTTCTATGGACACTAAGGATAGAGGAGGGCTACCCAGTAAGATGATAAAGGAAAAGAAATCTAGTGAAAAAAGAAAGGCAAGAAAACAAAGTGATGATCCAAATGGACTAAGGATGCTTTCGCATGAGGCTGCCAAACGTCTTGTTGGTCCACCTCTACAATACAATGTTCAAGAACATGTTGCTGAGATGCAACCACACAAAAGCCAGAGATCTTCCATGGAAGTGTCATCTAGCTTTAGTGAAGATGAAACTGCCAATCCCAGCTCGTCTCTTGATGAAGCAATCGGTTGCCGTTAA 1548 0.4012 MEESGKLPSEENKGSMEKNKKRKLKTPAQVYALEKFYNEHKYPTEEMKLELAEEVGLTEKQVSGWFCHRRLKDKRLLKDEAFANGRPDISSGVIQDHGSGLGQDSCGSTKHCDYRHLDPKEVESRGLYGGHDILVSDMAYERRNHYSENVGAMDETSSESSSSLQEKDSYDAEPSGYLTPDGALPTKIPKAATNMRYKPSGYLKVKGEIENPVITSVKKQLGRNYREDGPLLGIEFDPLPPGAFECKIADPFHETYYMANRALNYSPEISAVKRQPGLCARYDSYNTELYLEDSHMEGENLSDFQDKKSHQHSKQRPPLYSHTFRFPSTNSSLDMYEHSVGEAPAYNRKDNRRVGIRHGFEGLKSDYASNHSDHYDGNLAANLKDSLLHGYDNVDLKNAQSEYVKPKPSNLIRNPFVSMDTKDRGGLPSKMIKEKKSSEKRKARKQSDDPNGLRMLSHEAAKRLVGPPLQYNVQEHVAEMQPHKSQRSSMEVSSSFSEDETANPSSSLDEAIGCR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral484g00010 515 MobiDBLite consensus disorder prediction 150 169 - -
Pral484g00010 515 SMART HOX_1 18 80 IPR001356 GO:0003677
Pral484g00010 515 MobiDBLite consensus disorder prediction 426 456 - -
Pral484g00010 515 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Pral484g00010 515 MobiDBLite consensus disorder prediction 1 24 - -
Pral484g00010 515 MobiDBLite consensus disorder prediction 148 184 - -
Pral484g00010 515 SUPERFAMILY Homeodomain-like 18 86 IPR009057 -
Pral484g00010 515 MobiDBLite consensus disorder prediction 405 515 - -
Pral484g00010 515 Gene3D - 9 87 - -
Pral484g00010 515 MobiDBLite consensus disorder prediction 483 508 - -
Pral484g00010 515 CDD homeodomain 20 75 IPR001356 GO:0003677
Pral484g00010 515 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Pral484g00010 515 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral484g00010 Pral-Chr484 113637 118679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral484g00010 3 509 Homeobox Transcription Factor Family AT4G03250 38.202 2.96e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral484g00010 Homeodomain 9.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral484g00010 - - gmx:100805913 582.408