Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral484g00009 ATGGAAGAATCAGGCAAATTACCATCAGAAGAGAACAAAGGCTCTATGGAGAAAAATAAGAAGAGAAAACTCAAAACGCCTGCTCAGGTTTATGCTTTGGAGAAATTTTATAACGAGCACAAATATCCCACTGAGGAAATGAAATTAGAACTTGCTGAGGAAGTGGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCACCGAAGGCTAAAAGATAAAAGACTGTTGAAAGATGAAGCTTTTGCTAATGGGCGACCAGATATTTCAAGCGGTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACCAAACATTGTGATTATAGGCATCTTGATCCCAAAGAGGTTGAGAGTCGTGGCCTTTATGGTGGTCATGATATTTTAGTTTCAGATATGGCCTATGAACGTAGGAATCATTATTCCGAAAATGTTGGTGCAATGGATGAAACATCATCTGAGAGCAGCTCATCTTTGCAAGAAAAGGATTCATATGATGCTGAGCCTTCCGGATATCTAACACCTGACGGAGCTCTACCAACTAAAATTCCCAAGGCTGCCACAAACATGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATAGAAAACCCTGTTATAACTTCTGTTAAGAAGCAATTAGGAAGAAATTATCGGGAAGATGGTCCACTACTTGGTATTGAATTTGATCCACTTCCTCCAGGGGCATTTGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCGAATCGTGCTCTTAACTACTCTCCTGAAATTTCTGCTGTGAAAAGGCAACCCGGTCTTTGTGCTAGATATGATTCGTATAATACCGAATTGTATCTGGAAGATTCTCATATGGAAGGAGAAAACCTCTCTGATTTCCAGGATAAGAAGTCTCATCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTTTCGATTTCCTAGCACAAACTCTTCTCTGGATATGTATGAACATTCTGTCGGAGAAGCACCTGCATATAATAGAAAAGACAATCGTAGAGTCGGCATCAGGCATGGCTTTGAAGGGTTGAAATCTGATTATGCTTCTAATCATAGTGATCACTATGATGGTAACCTTGCAGCAAACTTAAAAGACTCACTGTTGCATGGATATGATAATGTCGATTTGAAGAATGCTCAGAGTGAATATGTAAAACCTAAGCCTTCAAACCTGATCAGGAATCCTTTTGTTTCTATGGACACTAAGGATAGAGGAGGGCTACCCAGTAAGATGATAAAGGAAAAGAAATCTAGTGAAAAAAGAAAGGCAAGAAAACAAAGTGATGATCCAAATGGACTAAGGATGCTTTCGCATGAGGTTTGTGCTGCCAAACGTCTTGTTGGTCCACCTCTACAATACAATGTTCAAGAACATGTTGCTGAGATGCAACCACACAAAAGCCAGAGATCTTCCATGGAAGTGTCATCTAGCTTTAGTGAAGATGAAACTGCCAATCCCAGCTCGTCTCTTGATGAAGCAATCGGTTGCCGTTAA 1554 0.4009 MEESGKLPSEENKGSMEKNKKRKLKTPAQVYALEKFYNEHKYPTEEMKLELAEEVGLTEKQVSGWFCHRRLKDKRLLKDEAFANGRPDISSGVIQDHGSGLGQDSCGSTKHCDYRHLDPKEVESRGLYGGHDILVSDMAYERRNHYSENVGAMDETSSESSSSLQEKDSYDAEPSGYLTPDGALPTKIPKAATNMRYKPSGYLKVKGEIENPVITSVKKQLGRNYREDGPLLGIEFDPLPPGAFECKIADPFHETYYMANRALNYSPEISAVKRQPGLCARYDSYNTELYLEDSHMEGENLSDFQDKKSHQHSKQRPPLYSHTFRFPSTNSSLDMYEHSVGEAPAYNRKDNRRVGIRHGFEGLKSDYASNHSDHYDGNLAANLKDSLLHGYDNVDLKNAQSEYVKPKPSNLIRNPFVSMDTKDRGGLPSKMIKEKKSSEKRKARKQSDDPNGLRMLSHEVCAAKRLVGPPLQYNVQEHVAEMQPHKSQRSSMEVSSSFSEDETANPSSSLDEAIGCR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral484g00009 517 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 511 - -
Pral484g00009 517 MobiDBLite consensus disorder prediction 148 183 - -
Pral484g00009 517 MobiDBLite consensus disorder prediction 150 169 - -
Pral484g00009 517 SMART HOX_1 18 80 IPR001356 GO:0003677
Pral484g00009 517 MobiDBLite consensus disorder prediction 485 510 - -
Pral484g00009 517 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Pral484g00009 517 MobiDBLite consensus disorder prediction 1 24 - -
Pral484g00009 517 MobiDBLite consensus disorder prediction 475 517 - -
Pral484g00009 517 Gene3D - 9 87 - -
Pral484g00009 517 MobiDBLite consensus disorder prediction 426 452 - -
Pral484g00009 517 MobiDBLite consensus disorder prediction 406 454 - -
Pral484g00009 517 SUPERFAMILY Homeodomain-like 18 86 IPR009057 -
Pral484g00009 517 CDD homeodomain 20 75 IPR001356 GO:0003677
Pral484g00009 517 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral484g00009 Pral-Chr484 113636 118679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral484g00009 3 511 Homeobox Transcription Factor Family AT4G03250 38.148 1.18e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral484g00009 Homeodomain 9.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral484g00009 - - gmx:100805913 588.186