Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00074 ATGGCTATTGATTCTGTGAGAACCATCTCCTTTCGTACTCTTCTTCTTCTCCATTCTCATTTCTATGACTACTGCTTAACTTCCTTTGGAACCTATGCGCCAAACAGCACCTACCAGTTCAACCTCAACATCCTCCTATCCAAAACCACTTCAAACCCTAACGTCGATTACGGCTTCTACAATCTCTCTTACGGTCAATCCCCAGACACAGTCTACGCAATCGGACTCTGCCGAGCAGATGTTACTCCAACCACCTGCCGTGACTGCCTCAGAAATTCCACCACCGTTACGCATTCCTGTTATGGTTACAGCAGCGCTATTTCAATATACGACGAGTGCCTATTGTTCTACTCAGGATCTGTAATATTCGGCGTCGTCCCGACTCTGGATTTCACTATCTACAATAGGAGCGTGAGGGAAAATATAACAAATTGGGATGAGTATAAGCTAGTTGTGAATGGCTTACTTGGAAGTCTGAGTGGGAAAGCAGCGTCCGGTGATTCTCACCGGAAATTCGCCGCCGGGAATACTGAAGCAGGATCCAGTGGGAGGAAGATATACGGTGTTGTTCAGTGCATGCCTGATTTGGATGAGTCGGAGTGTCGTAATTGCTTGGACGGGGCTATCTCGAAAATTCCAGAATGTTGTAATGGTAGCGTAGGAGGCAGGGTTTTTAAACCGAGCTGCAATATCAGATTTGAAAGTTACAGATTCTATGAAGCGACCGCTGATGTACCAATTTCAGTATCAGCACCGGCACCGGCACCGCTAGTTTCTCCTCGTTCCGTCTATATGACATCGTCACAGGGTGAACTTGAAGCTAACAATAATGAAATTAAGCCTGCTGAATCAATACAGTTCAACTTTAAAACCATCGAAGTCGCTACAAATTCCTTCTCTGATGCAAATAAGCTTGGGCAAGGTGGATTTGGACCTGTTTATAAGGGCAAGCTCTCCAATGGACAAAATATTGCTGTCAAAAGGTTGTCTGGGGTTTCTGGGCAGGGAGATACTGAATTCAAGAATGAAGTGCTGTTAATGGCTAAGCTTCAACACCGAAATTTAGTTCAGCTGCTTGGTTTTTGTTTGGAAGAGAAAGAACGACTCCTTATCTATGAACTTCTTGCTAATGGAAGCCTTGATTACTTCATATTTGATCCTATTAAACGTGGATATTTGGATTGGGGAACACGTTTCAATATAATAAATGGCGTTGCTCGAGGACTTCATTATCTCCATGAGGATTCCCAACAGCGAATTATTCACCGAGATCTTAAAGCAAGTAATATTCTATTGGATGCAAAGATGAATCCTAAAATATCGGATTTTGGTATGGCAAAATTATTTTCTATTGATGAATCTCAAGCCAAGACAAATCGAATTGTGGGAACCTTAGGGTATATGGCACCAGAGTATGCAAGATATGGACAAGTCTCTATAAAGTCAGATGTGTTTAGTTTTGGCGTACTAATTCTTGAGATTGTAAGGGGCCAAAAGAATGGTGGCATCCATGATGGGGAGAATATTGAGCACCTTCCAAGCTTTGCATGGAAAAACTGGAGGAAAGGAACATCATCAAATATTGTAGATCCCACATTAAATGACAATTCAAAAAGTGAAATACTGAGATGCATTCACATTGGATTGCTCTGTGTTCAAGAAAGGGCTTTTAATAGACCAACCATGGCTTCAGTTTTGCTCATGCTTGAGAGCGACTCTTTCTCTCTTCCAGAACCCTTGCAGCCGGCATTTTTTATGAAAAAAAACAGTTTATCACACATCAAATCTGAGGAGCACAGCTCTGTGCCAACAGCCTCAAGTGAACAAAATAGTAAAACTTCTGACATATTATCAGTAGATGAGGCCTCAATAACTAAGCTATATCCTCGCTAA 1893 0.421 MAIDSVRTISFRTLLLLHSHFYDYCLTSFGTYAPNSTYQFNLNILLSKTTSNPNVDYGFYNLSYGQSPDTVYAIGLCRADVTPTTCRDCLRNSTTVTHSCYGYSSAISIYDECLLFYSGSVIFGVVPTLDFTIYNRSVRENITNWDEYKLVVNGLLGSLSGKAASGDSHRKFAAGNTEAGSSGRKIYGVVQCMPDLDESECRNCLDGAISKIPECCNGSVGGRVFKPSCNIRFESYRFYEATADVPISVSAPAPAPLVSPRSVYMTSSQGELEANNNEIKPAESIQFNFKTIEVATNSFSDANKLGQGGFGPVYKGKLSNGQNIAVKRLSGVSGQGDTEFKNEVLLMAKLQHRNLVQLLGFCLEEKERLLIYELLANGSLDYFIFDPIKRGYLDWGTRFNIINGVARGLHYLHEDSQQRIIHRDLKASNILLDAKMNPKISDFGMAKLFSIDESQAKTNRIVGTLGYMAPEYARYGQVSIKSDVFSFGVLILEIVRGQKNGGIHDGENIEHLPSFAWKNWRKGTSSNIVDPTLNDNSKSEILRCIHIGLLCVQERAFNRPTMASVLLMLESDSFSLPEPLQPAFFMKKNSLSHIKSEEHSSVPTASSEQNSKTSDILSVDEASITKLYPR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00074 630 SUPERFAMILY Protein kinase-like (PK-like) 281 570 IPR011009 -
Pral4848g00074 630 Gene3D - 19 120 IPR038408 -
Pral4848g00074 630 Gene3D - 130 238 IPR038408 -
Pral4848g00074 630 Pfam Salt stress response/antifungal 25 118 IPR002902 -
Pral4848g00074 630 Pfam Salt stress response/antifungal 141 236 IPR002902 -
Pral4848g00074 630 ProSiteProfiles Gnk2-homologous domain profile. 130 238 IPR002902 -
Pral4848g00074 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pral4848g00074 630 MobiDBLite consensus disorder prediction 596 617 - -
Pral4848g00074 630 FunFam Cysteine-rich receptor-like protein kinase 28 375 577 - -
Pral4848g00074 630 Gene3D Transferase(Phosphotransferase) domain 1 375 576 - -
Pral4848g00074 630 FunFam Cysteine-rich receptor-like protein kinase 10 132 238 - -
Pral4848g00074 630 Gene3D Phosphorylase Kinase; domain 1 261 374 - -
Pral4848g00074 630 ProSiteProfiles Protein kinase domain profile. 299 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00074 630 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 628 - -
Pral4848g00074 630 ProSiteProfiles Gnk2-homologous domain profile. 20 122 IPR002902 -
Pral4848g00074 630 FunFam Cysteine-rich receptor-like protein kinase 10 263 374 - -
Pral4848g00074 630 SMART serkin_6 299 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00074 630 CDD STKc_IRAK 305 570 - -
Pral4848g00074 630 Pfam Protein kinase domain 300 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00074 Pral-Chr4848 719744 724788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00074 3 630 Receptor kinase-like Gene Family AT4G21410 43.696 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4848g00074 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00074 - - pcin:129293328 954.896