Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00073 ATGCTCAGATACTCTCCAAAGAACTTCTTTGGAGTGGCACAAATTAAGCCTCAGAAACTCATGTGGAATCAGAGAAATAGAACTTCACTCAATCAACCTGATGTCGATGCGCTAGCTCTGATTTACCAACTCATAAAAGAAGCGACAAATACATCTATGCTGTTCAGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGTCTTGTGCAGTGCACAAGAGACTTAAATAGTAGTTCATGCAGCTTCTGTTTGTCAAAATTAATGGTAGAAGCACAGAAGTTTCGCCAACAGAAGGCTGGTTGGCAAATATTTGGTCCAAGTTGCAATATCAGGCATGAAAATTACATATTCTATCAGCAAATCTTGGGACCAGAGATTGCCCCTATACCACCAATGAACCAGCCAGATGATGCAGGTTCTGCAGAAGATTTCACATCAAACCTTAGAGCCAGTGTAGTTATACTCGTACCAGTTGCAATGGCTGCAGCTTTTTTGGGTTTTGCAAGTTATGTATGTTTTCACAGGAAAAGAAGACTTAAAGGGGGAAAAAGAACTGATGAAATCCTGTTGCAGAAGTCGGGGACTTCAAAGAAGCACTACTCTAAAGAGAAAGGAACATCAAAAGATGAGTACGATGGTGAAGTTCAAAACTTTAGTTTGAAGACCATTAAGGTTGCTACAAACTATTTCTCAGAAGAAGCCAAACTTGGGAAAGGAGGATTTGGACTCGTTTTCAAGGGGATGTTGAGTAATGGCAAGGAGGTAGCAGTTAAAAGGCTTTCATTCAAATCAGGGCAAGGCCTTGAAGAATTCAAAAATGAAGTGACATTGATAGCAAAACTTCAACACAAAAATCTTGTGAGGCTTTTGGGGTTGTGTCTGGAAGAAAATGAAAAGCTTCTAGTCTATGAATACATGCCCAACACCAGCCTTGACACCTTCTTGTTTGATCGAACAAAACGTCAACAACTAGATTGGGCCAAGAGGAGGAATATTATAAAGGGAATTGCAAGAGGACTTCTGTACCTGCATGAGGACTCAAGACTAAAAATTATCCACAGAGATCTAAAAGCAAGCAATGTGTTACTAGACGAAGAGATGAATGCAAAAATTTCCGATTTTGGAACAGCTAGAATTTTTGGCAGCAATCAAAATCAAGCTAGTACCGAAAGAGTTATTGGTACATATGGATATATGGCACCTGAATATGCCTTAGAGGGAGTATTTTCCATCAAGTCGGATGTTTACAGCTTTGGTGTCATCATGCTAGAAATTATCAGTGGAAAAAGAAACACCGGCTTCTACCAACCAGAACGTGGTTTAAGTCTTCTTTCCCACGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGAGTGAATTGGTCAAAACTTGTGCTGATAAGGATGAAGCTTTGAGATGGATCCATATTGGGCTTCTATGTGTTCAAGAGAACCCACAAGATAGGCCCACTATGTCATCGGTTGTTCTAATGCTAGCAAGTTCCAGCAATCTTCCTCGCCCATTTGCACCTCCATTTTCAGTCGGCAGATTCTTCGCTGCTATTCAGTCCTCCTCCACATCTGTTTCCACTGAGAAAGTTTCATGTGATTGTTGA 1641 0.4095 MLRYSPKNFFGVAQIKPQKLMWNQRNRTSLNQPDVDALALIYQLIKEATNTSMLFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLSKLMVEAQKFRQQKAGWQIFGPSCNIRHENYIFYQQILGPEIAPIPPMNQPDDAGSAEDFTSNLRASVVILVPVAMAAAFLGFASYVCFHRKRRLKGGKRTDEILLQKSGTSKKHYSKEKGTSKDEYDGEVQNFSLKTIKVATNYFSEEAKLGKGGFGLVFKGMLSNGKEVAVKRLSFKSGQGLEEFKNEVTLIAKLQHKNLVRLLGLCLEENEKLLVYEYMPNTSLDTFLFDRTKRQQLDWAKRRNIIKGIARGLLYLHEDSRLKIIHRDLKASNVLLDEEMNAKISDFGTARIFGSNQNQASTERVIGTYGYMAPEYALEGVFSIKSDVYSFGVIMLEIISGKRNTGFYQPERGLSLLSHAWRLWNEGKGLELVESELVKTCADKDEALRWIHIGLLCVQENPQDRPTMSSVVLMLASSSNLPRPFAPPFSVGRFFAAIQSSSTSVSTEKVSCDC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00073 546 Pfam Protein tyrosine and serine/threonine kinase 238 505 IPR001245 GO:0004672|GO:0006468
Pral4848g00073 546 Gene3D - 17 122 IPR038408 -
Pral4848g00073 546 FunFam Uncharacterized protein 311 512 - -
Pral4848g00073 546 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 199 310 - -
Pral4848g00073 546 CDD STKc_IRAK 241 507 - -
Pral4848g00073 546 ProSiteProfiles Gnk2-homologous domain profile. 15 122 IPR002902 -
Pral4848g00073 546 Gene3D Transferase(Phosphotransferase) domain 1 311 514 - -
Pral4848g00073 546 SUPERFAMILY Protein kinase-like (PK-like) 217 507 IPR011009 -
Pral4848g00073 546 SMART serkin_6 235 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00073 546 Pfam Salt stress response/antifungal 52 120 IPR002902 -
Pral4848g00073 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Pral4848g00073 546 ProSiteProfiles Protein kinase domain profile. 235 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00073 546 Gene3D Phosphorylase Kinase; domain 1 209 310 - -
Pral4848g00073 546 ProSitePatterns Protein kinases ATP-binding region signature. 241 263 IPR017441 GO:0005524
Pral4848g00073 546 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 58 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00073 Pral-Chr4848 714818 717934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00073 1 516 Receptor kinase-like Gene Family AT4G05200 43.726 3.12e-142 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4848g00073 PK_Tyr_Ser-Thr 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00073 - - pcin:129293336 672.544