Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00067 ATGGATTCCTTGCAAATTGACATGGCTACAATTAAAGTGGCTACGGACGATTTTTCTGAAAAAAGCAGGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGAGTTCTTCCTAATGGACAAGAGATAGCTGTGAAGAGATTGTCAAGAACTTCATCGCAGGGAGTTGAAGAATTCAAAAATGAGGTTTTGCTGATAGCTAAACTTCAACACGGAAATTTAGTAAGGTTACTGGGATTCTGCCTTGAAGATGATGAGAAGATACTTATCTATGAATATGTGCCTAACAAAAGCCTTAACCATTTCCTATTTGATCCTTTGAAGCAAAGGAAATTAACTTGGCCTGAACGTTTTAAGATTATAAAAGGAATTGCTCGAGGAATCCTATATTTACATGAAGACTCTCGTCTTAAGGTCATACATCGTGATCTTAAACCAAGCAATGTTTTGTTAGATAGTAACATGAGTCCAAAAATCTCAGATTTTAGTATGGCAAGACTAATAACACTAGACCAGGTTGAAGGAAGCACAAACAGGATTGTTGGAACATAG 552 0.3678 MDSLQIDMATIKVATDDFSEKSRIGKGGFGEVYKGVLPNGQEIAVKRLSRTSSQGVEEFKNEVLLIAKLQHGNLVRLLGFCLEDDEKILIYEYVPNKSLNHFLFDPLKQRKLTWPERFKIIKGIARGILYLHEDSRLKVIHRDLKPSNVLLDSNMSPKISDFSMARLITLDQVEGSTNRIVGT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00067 183 Gene3D Transferase(Phosphotransferase) domain 1 94 183 - -
Pral4848g00067 183 SUPERFAMILY Protein kinase-like (PK-like) 7 183 IPR011009 -
Pral4848g00067 183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pral4848g00067 183 FunFam Cysteine-rich receptor-like protein kinase 10 1 93 - -
Pral4848g00067 183 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 94 183 - -
Pral4848g00067 183 ProSiteProfiles Protein kinase domain profile. 18 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00067 183 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Pral4848g00067 183 Pfam Protein kinase domain 19 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00067 183 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 183 - -
Pral4848g00067 183 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
Pral4848g00067 183 SMART serkin_6 18 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00067 Pral-Chr4848 573084 574160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00067 3 183 Receptor kinase-like Gene Family AT4G11480 65.746 3.19e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4848g00067 Pkinase 2.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00067 - - mtr:25485264 297.745