Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00066 ATGGGGGTTAACAAGTTCAATGGAGACATACCAACTGACATTGGAAATTTGACCAAACTTGAGCGGCTACTTCTTAGCAGAAACAACTTGCAAGGTTATATACCCAAGGATATAGGCAATCTTGTTAGACTTGAAATCTTGGATTTGGGAACAAACAATCTGCATGGACTTATTCCTTCCAATATATTTAACATTTCAACATTGAAAATAGTGTTCCTTGATTCGAATTTCCTCTCTGGCCTTTTGCCATCATATTTAGGAATTGGTCTTTCCAACCTGGAGGAGTTAGATTTGCAAGGAAATGAACTAACTGGACAAATTCCAAATAGCATATCAAATGCTTCTAAGCTCATTAATTTAGATTTGTCATCAAATAAATTTAATGGAGCTATACCCACTACCCTTGGAAGTTTAACAAACTTGATAGAATTAGATTTGGATGAGAATCATTTGACAGGGTTGATTCCAGACATCGTTAACCAATTACATAACCTTCAGCGTTTAAGTCTAAGTGACAACAAATTGCAAGGGTTCATTATAAATGAACTTTGCCAACTCAAAGGTTTGAGTGAGTTGTATCTTGCTAAGAACATGTTTTCAGGAGCAATTCCAGGATGTCTCGGAAATACTTCTTTGCAGAAGTTGAATTTTAGCTCTAACAAATTGATATCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATCTTGGTTTTAGACATATCCTCTAATGCACTAAGTGGAATGATTTCACCAGAGGTATCAAACTTGAGATCAATTATACTATTGAACTTGTCCAGAAACCAAATTTCAGGCAGCATCCCTGTAACTATGGGCAGCTTGCAAGCTTTACAAACTCTATCCTTAGCTCACAACAAATTGCAAGGGCCTATTCCTGAAGCGTTTAGTGGCATGATAAGCATGGAGTCTATGGATCTTTCTTATAATTACTTGTCTGGGGTGATTCCAAAGTCCTTAGAGTCATTACTCTATCTTAACTACATCAATTTTTCCTACAATCTATTGCATGGAGAAATTCCAGATGGTGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCAAACTACAAATTCAACCATGTAGGAGAGGAAACAAGCACATATCAAGCAAAATGATGCTGATGATAAAATGCTTATTGCCCATCATGTTTGTCATTTTGGTTGTTTCAAGCATTGTCTTTCTAAAGCATAAGAGGCATGATGATAATTATTCAACCAAAAAGGATTTAACAAATTTGGGTACACCAACTAGGATATCTTATTATGAACTTCTACAAGGAACAAATGGATTTGATGAGAGTAATCTTCTAGGCTCTGGAAGTTTTGGATCGGTATACAAAGCAATTCTTCCGAATGAAAATATAGTTGCTGTCAAAGTATTTAATAACTTAGACATGCAAGAAGCATTGAGAAGTTTTGATACTGAATGTGCTGCCATATGCAATTTACGCCATCGCAATCTCATTAAAACCATCAGCAGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGGGAGTCTTGATAGATGGTTGTACTCTCATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATAGACGTGGCAACAGCTTTGGAGTATCTTCATCATGATTCTTCTATACTAGTTGTCCACTGCGATGTGAAACCAAGTAATATTTTGTTGGATGAAGATATGGTGGCTCATCTTAGCGATTTTGGTATTGCTAAATTGTTTGGTGAGCAATCAGAAATTTATACCAAATCTTTGGCTACTATTGGCTACATGGCACCAGAGTATGGATCAAAAGGAGTCGTCTCTCCCAAAGCAGATGTGTATAGTTATGGTATATTGCTGATGGAAATGTTTACGAGGAAGAAGCCAACAGATGGGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTCAGCAAGTCCACACCACATTCAATCATCAATATTATAGATGCAAATTTGCTGCATAGAAAAAATCAAAATATTGATAATATATTATCTCATATATCATCAGTTTTTGATCTAGCATTAAAATGTTGCAATGATTTACCTGAAGCACGACTTACTATGATTGATGTTGTAGTATCATTGAAAAAGATCAAGGCTTTGTTAATGAAAAATGCTAGGGACATTATTAGTTGA 2208 0.3519 MGVNKFNGDIPTDIGNLTKLERLLLSRNNLQGYIPKDIGNLVRLEILDLGTNNLHGLIPSNIFNISTLKIVFLDSNFLSGLLPSYLGIGLSNLEELDLQGNELTGQIPNSISNASKLINLDLSSNKFNGAIPTTLGSLTNLIELDLDENHLTGLIPDIVNQLHNLQRLSLSDNKLQGFIINELCQLKGLSELYLAKNMFSGAIPGCLGNTSLQKLNFSSNKLISHIPSSLWSLKDILVLDISSNALSGMISPEVSNLRSIILLNLSRNQISGSIPVTMGSLQALQTLSLAHNKLQGPIPEAFSGMISMESMDLSYNYLSGVIPKSLESLLYLNYINFSYNLLHGEIPDGGPFQNFTAQSFMMNKDLCGKSKLQIQPCRRGNKHISSKMMLMIKCLLPIMFVILVVSSIVFLKHKRHDDNYSTKKDLTNLGTPTRISYYELLQGTNGFDESNLLGSGSFGSVYKAILPNENIVAVKVFNNLDMQEALRSFDTECAAICNLRHRNLIKTISSCSNDHFKSLIMEFMVNGSLDRWLYSHNYYLNVLQRLNIMIDVATALEYLHHDSSILVVHCDVKPSNILLDEDMVAHLSDFGIAKLFGEQSEIYTKSLATIGYMAPEYGSKGVVSPKADVYSYGILLMEMFTRKKPTDGMFVQGLSLKDWVSKSTPHSIINIIDANLLHRKNQNIDNILSHISSVFDLALKCCNDLPEARLTMIDVVVSLKKIKALLMKNARDIIS 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00066 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Pral4848g00066 735 SUPERFAMILY Protein kinase-like (PK-like) 421 719 IPR011009 -
Pral4848g00066 735 Gene3D Phosphorylase Kinase; domain 1 407 523 - -
Pral4848g00066 735 Pfam Protein kinase domain 448 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00066 735 SUPERFAMILY RNI-like 4 347 - -
Pral4848g00066 735 Gene3D Transferase(Phosphotransferase) domain 1 524 732 - -
Pral4848g00066 735 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Pral4848g00066 735 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Pral4848g00066 735 Pfam Leucine Rich Repeat 92 113 IPR001611 GO:0005515
Pral4848g00066 735 Gene3D Ribonuclease Inhibitor 1 378 IPR032675 -
Pral4848g00066 735 SMART LRR_typ_2 41 65 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 17 40 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 281 304 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 162 186 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 210 233 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 138 161 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 305 328 IPR003591 -
Pral4848g00066 735 SMART LRR_typ_2 90 114 IPR003591 -
Pral4848g00066 735 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 524 732 - -
Pral4848g00066 735 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Pral4848g00066 735 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 155 381 - -
Pral4848g00066 735 SMART LRR_sd22_2 162 191 - -
Pral4848g00066 735 SMART LRR_sd22_2 281 307 - -
Pral4848g00066 735 SMART LRR_sd22_2 41 67 - -
Pral4848g00066 735 SMART LRR_sd22_2 90 122 - -
Pral4848g00066 735 PANTHER OS04G0122200 PROTEIN 127 724 - -
Pral4848g00066 735 ProSiteProfiles Protein kinase domain profile. 447 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00066 735 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 85 - -
Pral4848g00066 735 SMART serkin_6 447 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00066 Pral-Chr4848 536051 546645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00066 4 731 Receptor kinase-like Gene Family AT3G47570 36.892 1.83e-152 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral4848g00066 Pkinase 9.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00066 - K13420 pcin:129285519 1032.71