Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00060 ATGGCTATTGATTCTGTGAGACCCACTTCCTTTCATACTCTTCTTATTCTCCATTCTCATTTCTATGATTATTGCTTCACTTCCTTTGGAACCTATGCGCCAAACAGCACCTACCAGTTCAACCTCCACATCCTCCTATCAAAAATCACTTCAAACCCTAACGTCCATTACGGCTTCGACAATCTCTCTTACGGTCAATCCCCAGACACAGTCAACGCAATCGGACTCTACGGAGCAGACGTTACTCCGACCTCCTGCCGTGACTGCCTCAGAAACTCCACCACCGTCACGCATTCCTGTTATAATTACAGCACCGCAATTTCAATACACGACGAGTGCCTATTGTTCTACTCAGGATATGTAATATTCGGTATCGTCCCGACTCTGGATTTCACTATCTACAATAGGAGCGTAAGGGATAATATAACAAATTGGGATCATTATAAGCTAGTTGTGAATGGCTTACTTGGGAGTCTGAGTCGGAAAGCAGCGTCCGGTGACTCTCGCAGGAAATTCGCCTTCGGGAATACTGAAGCAGGATCGGGGGGTAGGAAGATATACAGCGTTGTTCAGTGCATGCCTGATTTGAATGAGTCAGAGTGTCGTAATTGCTTGGACGGGGCTATCTCGAAAATTCCAGAATGTTGTAACGGTAGCGAAGAAGGCAGAGTTTTTAAACGGAGCTGCAATATCAGATTTGAGAGTTACAGATTCTATGAAGCTACGGCTGACGTGCCGACTTCAGTATCAGCACCGGCAACGGCACCGGCACTGCTAGTTTCTCCTCGTTCCGTCGATATGACGTCGTCACAGGGTGAACTTGAAGCTAACGATAATGAAATTAAGCCTGCTGAATCAATACAGTTCAACTTTAGAACCATCAAAGTCGCTACAAATTCCTTCTCTGATGCAAATAAGCTTGGGCAAGGTGGATTTGGACCTGTTTATAAGGGCAAGCTATCCAATGGACAAAATATTGCTGTCAAAAGGTTGTCTGGGGTTTCTGGGCAGGGAGATACTGAATTCAAGAATGAAGTGCTATTAATGGCTAAGCTTCAACACCGAAATTTAGTTCAGCTGTTTGGTTTTTCGTGGGAAGCCCTGATTACTTCATATTTCGTGGGAAATTCTCTTTAA 1137 0.4459 MAIDSVRPTSFHTLLILHSHFYDYCFTSFGTYAPNSTYQFNLHILLSKITSNPNVHYGFDNLSYGQSPDTVNAIGLYGADVTPTSCRDCLRNSTTVTHSCYNYSTAISIHDECLLFYSGYVIFGIVPTLDFTIYNRSVRDNITNWDHYKLVVNGLLGSLSRKAASGDSRRKFAFGNTEAGSGGRKIYSVVQCMPDLNESECRNCLDGAISKIPECCNGSEEGRVFKRSCNIRFESYRFYEATADVPTSVSAPATAPALLVSPRSVDMTSSQGELEANDNEIKPAESIQFNFRTIKVATNSFSDANKLGQGGFGPVYKGKLSNGQNIAVKRLSGVSGQGDTEFKNEVLLMAKLQHRNLVQLFGFSWEALITSYFVGNSL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00060 378 Pfam Salt stress response/antifungal 141 236 IPR002902 -
Pral4848g00060 378 Pfam Salt stress response/antifungal 25 119 IPR002902 -
Pral4848g00060 378 FunFam Cysteine-rich receptor-like protein kinase 10 132 238 - -
Pral4848g00060 378 Gene3D - 130 238 IPR038408 -
Pral4848g00060 378 Gene3D - 19 121 IPR038408 -
Pral4848g00060 378 ProSiteProfiles Gnk2-homologous domain profile. 20 122 IPR002902 -
Pral4848g00060 378 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Pral4848g00060 378 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 274 371 - -
Pral4848g00060 378 ProSiteProfiles Gnk2-homologous domain profile. 130 238 IPR002902 -
Pral4848g00060 378 SUPERFAMILY Protein kinase-like (PK-like) 283 367 IPR011009 -
Pral4848g00060 378 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 21 246 - -
Pral4848g00060 378 ProSiteProfiles Protein kinase domain profile. 301 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4848g00060 378 Pfam Protein tyrosine and serine/threonine kinase 305 366 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00060 Pral-Chr4848 353272 356914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00060 11 377 Receptor kinase-like Gene Family AT4G21410 36.150 1.12e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4848g00060 Stress-antifung 7.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00060 - - pcin:129293328 494.582