Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00019 ATGTCTCTTTCATCGGAGTACTCTGCCGCCGGTTATTTGTTCTGCCGCGAGGACGCCGCCGACATCACCATCGGCGAACTCATCGACGTAGAGTCACACCTGATGCCGAGCCAAGATTACCTGAATCGCCTCCGTAATTGTCCGATCGACTTCACCAATCGCCAGAAGTCCACTAACTGGATCTTCAAGGTGCACGCCCATTACCAGTTTCGTCCGGTGACGGCGTTACTCTCCGTCAACTACTTCGACCGTTTCCTCTCGTGCTCTTCTCTTCCGCCAGCTGGGTGGCCGTTTCAGCTATTATCAGTGGCGTGCTTGTCTCTTGCGGCGAAAATGGAGGAACGTCGAATCCCGAACTTGCTAGACCTGCAAATATTCGATCCCGGCTTCGTTTTTGAATCCAAGTCGGTTCAGAGGATGGAGCTCTGGATCATGTCCCAACTCAACTGGAGATTGCGATCTGTCACGCCCTTCGATTACCTCCATTACTTCTTCTCCAAGCTCCCTGCGTCCTCATCCGATCCTAAACCCGGATCGGCGACCCGGTTGTTCAGAGCCTCCCAGTTCATTCTTACCACCACCCGCGTGCTCGATTTCTTGAGATTCGCACCGTCAAGTATTGCCGCCGCCGCCGTGCTCTGTTCGGCCGGCGTAGCCTCTGACGTCTACCCCCAATCACTGCCGTGTTTTCATGACAGCATGAACAAAGAAATGATGAGAAGCTGTCATCGACTAATGGAGACGTACGTGGATGACACGTGTCGCGGGAACGAGGCGGCTCCTCCTTCAAGTCCAGCAGGTGTGCTCGACGCCGCCGCCGCCGCCGCTCATGCGGGCTCCGACACCCGTTCTGAGAACGCAGGCTCCGCCGCCACTACCCAAACCGACCAGCGGCGGAGGAAGCGGCTGCGATCCTCTGCACCGAATGTACAGGCAGTTTAG 942 0.5637 MSLSSEYSAAGYLFCREDAADITIGELIDVESHLMPSQDYLNRLRNCPIDFTNRQKSTNWIFKVHAHYQFRPVTALLSVNYFDRFLSCSSLPPAGWPFQLLSVACLSLAAKMEERRIPNLLDLQIFDPGFVFESKSVQRMELWIMSQLNWRLRSVTPFDYLHYFFSKLPASSSDPKPGSATRLFRASQFILTTTRVLDFLRFAPSSIAAAAVLCSAGVASDVYPQSLPCFHDSMNKEMMRSCHRLMETYVDDTCRGNEAAPPSSPAGVLDAAAAAAHAGSDTRSENAGSAATTQTDQRRRKRLRSSAPNVQAV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00019 313 FunFam D6-type cyclin 150 244 - -
Pral4848g00019 313 MobiDBLite consensus disorder prediction 256 313 - -
Pral4848g00019 313 ProSitePatterns Cyclins signature. 54 85 IPR006671 -
Pral4848g00019 313 PANTHER CYCLINS 17 247 IPR039361 -
Pral4848g00019 313 Gene3D - 37 153 - -
Pral4848g00019 313 FunFam D6-type cyclin 37 149 - -
Pral4848g00019 313 CDD CYCLIN_AtCycD-like_rpt1 53 150 - -
Pral4848g00019 313 CDD CYCLIN_AtCycD-like_rpt2 155 246 - -
Pral4848g00019 313 SMART Cyclin_C_2 155 280 IPR004367 -
Pral4848g00019 313 Pfam Cyclin, C-terminal domain 155 250 IPR004367 -
Pral4848g00019 313 SUPERFAMILY Cyclin-like 23 152 IPR036915 -
Pral4848g00019 313 SMART cyclin_7 59 146 IPR013763 -
Pral4848g00019 313 Pfam Cyclin, N-terminal domain 27 152 IPR006671 -
Pral4848g00019 313 Gene3D - 27 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00019 Pral-Chr4848 112087 113751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00019 23 257 Core Cell Cycle Gene Families AT1G70210 44.444 2.64e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00019 K18810 - jre:109009685 325.865