Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00003 ATGGAGGTCTGGTGCGTTGTCGTGGTTTCCCTCCTTCTCTGCCTTTTCATCAGAGCTTTCTTCAACCTTCTCCCTACCTCTCCCTCCCTTCCTCCCCCTCCTGGCCCTTCTCGCATTCCCATCGTCGGTTCCTCTATCTTTCTGCGCAGATCATTCTCTGAGCTCGAACCTTTTCTCCGAAACCTTCGTGCCAAGTACGGTCCAATCTTCACTCTCCCCGTCGGCTCTCGTTCTGCTATATTCATCGCCGATCGTTCTCTCGCCCACCAAGCCCTCATTCAACACGGCGCCGTCTTCTCCGACCGCCCCAAGTCCCTCCCCGCCGCTAGGATCATCAACAGTAACCAGCATAACATCAACTCTGCTCGTTACGGCCCCACATGGCGAACTCTTCGTCGCAACCTCACTTCCGAGATGCTTCACCCGACCCGGATCAAAGCCTTCGCGGGTACCCGAAAATGGGTTCTGGACGTGCTCTTCAATCGCCTCAGGTCTGATTCGGAATCAAGCAAGTCCATTAAGGTGATTGACCATCTCCACTATGCTATGTTCTGCTTGCTGGTGTTCATGTGCTTCGGCGAGAGGTTAAACGACAAGCAAGTCAAGGATATTGAATATGTTGAGCGTCGTTTACTTACGAGCTTCTCCAGATTCAATGTGCTAAATTTCTGGCCAAGGGTTACGAAAATATTGTTCCGCAAGCGTTGGGAAGAACTGTACCAGATTCGGAAGGAACAGGAAGATGTGTTGATTCCACTAATAAGAGCGAGAAAGAAAGCCAGGGAAGAGGAGAAGAACAAAACCAAAGAGGACAATAGCAACAGAGATGAAGTTACAGTGTCATATGTGGATACGTTGTTGGATTTACAGTTGCCTGAGGAGAAACGCAAGCTTGAAGAAGGTGAGCTGGTTTCTTTATGTTCTGAGTTTCTGAATGGAGGGACGGATACGACGGCTACCACTTTGCAATGGATTATGGCAAACTTGGTGAAGTATCCACATATTCAGGAAAGGCTTGTGGAGGAAATAAGAGATGTGGTGGGTGAGAGAGAGGAGAAGGAAGTGAAAGAGGAAGATTTGATCAGATTGCCATATCTTAAGGCTATAATTTTGGAAGGATTAAGGCGTCACCCACCTGGGCATTTTGTGTTGCCACACGCAGTGACAGATGATGTGGTTTTGAATGGTTACTTGGTGCCTAAGAATGGGTCAGTAAATTTCATGGTGGCTGAAATCGGATTGGATCCGAAAGAGTGGGAAAATCCAATGGAATTCAAGCCAGAGAGGTTCTTGAATGGGGGTGAAGCATTTGATATAACGGGAAGTAGAGAGATCAAAATGATGCCTTTTGGAGTTGGAAGAAGGATATGTCCGGGTTATAATTTGGCTCTGCTTCATTTGGAGTACTTTGTGGCTAATCTGGTATGGACTTTTGAGTGGAAGTCTTCAAGTGGTGATATTGATCTGTCAGAAAAACTGGAATTCACTGTAGTAATGAAAAATCCATTACAAGTTCATATATCTCCGAGGTCTTAA 1536 0.4674 MEVWCVVVVSLLLCLFIRAFFNLLPTSPSLPPPPGPSRIPIVGSSIFLRRSFSELEPFLRNLRAKYGPIFTLPVGSRSAIFIADRSLAHQALIQHGAVFSDRPKSLPAARIINSNQHNINSARYGPTWRTLRRNLTSEMLHPTRIKAFAGTRKWVLDVLFNRLRSDSESSKSIKVIDHLHYAMFCLLVFMCFGERLNDKQVKDIEYVERRLLTSFSRFNVLNFWPRVTKILFRKRWEELYQIRKEQEDVLIPLIRARKKAREEEKNKTKEDNSNRDEVTVSYVDTLLDLQLPEEKRKLEEGELVSLCSEFLNGGTDTTATTLQWIMANLVKYPHIQERLVEEIRDVVGEREEKEVKEEDLIRLPYLKAIILEGLRRHPPGHFVLPHAVTDDVVLNGYLVPKNGSVNFMVAEIGLDPKEWENPMEFKPERFLNGGEAFDITGSREIKMMPFGVGRRICPGYNLALLHLEYFVANLVWTFEWKSSSGDIDLSEKLEFTVVMKNPLQVHISPRS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00003 511 FunFam Cytochrome P450 family protein 26 511 - -
Pral4848g00003 511 Pfam Cytochrome P450 33 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 CDD CYP77_89 65 504 - -
Pral4848g00003 511 Gene3D Cytochrome P450 27 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 SUPERFAMILY Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00003 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 503 - -
Pral4848g00003 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00003 Pral-Chr4848 24491 26297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00003 1 510 Cytochrome P450 AT1G64940 59.570 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00003 K24184 - gmx:100805244 702.59