Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4848g00002 ATGGAGGTTTGGTTCGTCGTCCTCGTCTCTGTCTCTCTCTGCCTTCTTCTCAGAGCTTTCTTCAACCTTCTCCTTCCTTCTTCCTCTCCTCCTCTGCCTCCTGGTCCTCTCCGTTTCCCCTTCATCGGTTCTTTCACTTTGCTGGGAAAATCACTCTTACAACTCGAACCCACTCTCCGAAGTCTTCACGCCAAGTATGGCCCCATCGTCAGTCTCCCTCTCGGTCCTCGTCCTGCCATATTCATTGCTGATCCATCTCTTGCCCACCAAGCTTTCGTCCAAAACGGCGCCGTCTTCTCTGATCGTCCCGAGCCAGACCCTTTTACGAGGTTAATCGACATTAACCTACGTACCATTCGCTCTTCTTTCTACGGTCCAGCATGGCGCTTGTTTCGTCGAAATCTCACCACCGAGATGCTTCACCCGACCCGGATCAAATCATTTTCCGGGGAACGTAAATGGGTTCTGGACATGCTTCTCAGTCGTCTCAGGTCTGACTCAGAATCAAACAAGCCCATTATGCTGATTGACCATCTCCGTTATACTATGTTCTCCTTGATTCTGTTCATGTGCTTCGGTGAGAGGTTAGATGAAAAGAAAATCAGGGATATAGACTATGTTCTTCATCGTTTTCTTTTGGACTTCTACAAGTTCAATGTGCTAAATTTCTGGCCAAGAGTGACCAGAATATTGTTTCGCAAACGCTGGGAGGATTTGCTGCAACTGTTAAAGGACCGAGAAAATTTGATAATTCCACTGATAAGAGCGAGAAAGAAAGCCAAGGAAGAGAGATTGAGTAAGACGACGAAGGAAAGTAGAAGTACTGTGTTCTACATGGATGCATTGTTGGACTTGGAGTTGCCTGAGGAGAAGCGCAAGCTAGAAGAATCTGAAATGGTTTCGGCATGCGCAGAGTTTCTTGATGCAGGGACAGACTCAACATCTGTTACACTACAATGGATTCTGGCAAGTTTGGTGAAGTATCCTCAGGTTCAACAAAGGCTTGCGGATGAAATAAGAGAAGTGATGGGTGAAAGAGAGGACAAGGAAGTGAAGCAGGAAGATTTGAACAGATTGCCATATCTGAAAGCTGTGATTTTGGAGGGATTAAGGCGTCATCCACCTACTCACTTCCCACTGACACATGCAGTGTCAGAAGACGTGGTTTTGAATGGTTACTTGGTGCCAAAGAAAGGGACTGTGAATTTCATGTTGGCAGAGATGGGGTGGGATCCAAAGGTGTGGGAAGATCCAATGGAGTTCAGGCCTGAGAGGTTCTTGAATGATAATGGTGAATGGAATGGTATGGAATGGGATGCAAGTGAAGCATTTGATATTAAAGGAGGGAAAGAGATGAAGATGGTGCCATTTGGGTTAGGAAGAAGGATGTGCCCAGCTTCTAATATGGCAATGCTTCATTTGGAGTATTTTACAGCCAATCTGATTTGGAACTTTGAATGGAAGCCTGCAACTGATACTGTTGATTTGTCAGAGACACAGGAATTCTTGGTCGTCATGAAAAATCCATTGCAGGTTCACATATCTCCCAGGCTTTAG 1557 0.4566 MEVWFVVLVSVSLCLLLRAFFNLLLPSSSPPLPPGPLRFPFIGSFTLLGKSLLQLEPTLRSLHAKYGPIVSLPLGPRPAIFIADPSLAHQAFVQNGAVFSDRPEPDPFTRLIDINLRTIRSSFYGPAWRLFRRNLTTEMLHPTRIKSFSGERKWVLDMLLSRLRSDSESNKPIMLIDHLRYTMFSLILFMCFGERLDEKKIRDIDYVLHRFLLDFYKFNVLNFWPRVTRILFRKRWEDLLQLLKDRENLIIPLIRARKKAKEERLSKTTKESRSTVFYMDALLDLELPEEKRKLEESEMVSACAEFLDAGTDSTSVTLQWILASLVKYPQVQQRLADEIREVMGEREDKEVKQEDLNRLPYLKAVILEGLRRHPPTHFPLTHAVSEDVVLNGYLVPKKGTVNFMLAEMGWDPKVWEDPMEFRPERFLNDNGEWNGMEWDASEAFDIKGGKEMKMVPFGLGRRMCPASNMAMLHLEYFTANLIWNFEWKPATDTVDLSETQEFLVVMKNPLQVHISPRL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4848g00002 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Pral4848g00002 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 FunFam Cytochrome P450 family protein 26 518 - -
Pral4848g00002 518 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 510 - -
Pral4848g00002 518 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 SUPERFAMILY Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 Pfam Cytochrome P450 33 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4848g00002 518 CDD CYP77_89 65 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4848g00002 Pral-Chr4848 18428 20203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4848g00002 1 517 Cytochrome P450 AT1G64940 50.669 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4848g00002 K24184 - gmx:100795683 598.971